Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2470 |
Symbol | |
ID | 5372381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2946527 |
End bp | 2947015 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830683 |
Product | NUDIX hydrolase |
Protein accession | YP_001366670 |
Protein GI | 153000989 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000173828 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCAAC GATATAAACC CAATGTGACC GTCGCTTGTG TTATTCATGC GACTTCACAG GACAAATATC TGATGGTAGA AGAGTGGATT GATGGCGAGC AGCGCTTTAA TCAGCCAGCG GGTCACTTAG AAGCAAATGA AAGCTTAATC CAAGCCTGTG AGCGCGAAGT ATTTGAGGAA ACGGGGTTAT CACTTAACCC CCAAGGACTC GTCGGCATCT ATCAATTTAG CGCCAGTGAA GACTTAGCCT TTGTGCGCTT TACCTTCTTC GTGCAGTTAG ATGATATGCC CTCACCTGCG CCGCAGGACA AGGCTATCCA CAGTGCGCAC TGGCTGAGTT TTGCACAGAT AGAAGCCAAG TCATCTTTAC TGCGCAGCCC CTTAGTGCTC GATTGCCTAA AAGACTATCT TAATAACGCA CAACAAGGCC AAACTTATCC CCTCTCCTTA CTCAATAGTG ACCGCCTCGC GATAGCCCAA GCGAGTTAG
|
Protein sequence | MSQRYKPNVT VACVIHATSQ DKYLMVEEWI DGEQRFNQPA GHLEANESLI QACEREVFEE TGLSLNPQGL VGIYQFSASE DLAFVRFTFF VQLDDMPSPA PQDKAIHSAH WLSFAQIEAK SSLLRSPLVL DCLKDYLNNA QQGQTYPLSL LNSDRLAIAQ AS
|
| |