Gene Shew185_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2394 
Symbol 
ID5373577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp2850356 
End bp2851027 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID640830608 
Producthypothetical protein 
Protein accessionYP_001366595 
Protein GI153000914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000175566 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCACTG ACACCAATCC GTATTTTAGT GTGCCTCACC CTTTTACCGC CTACTTAAGT 
CTGTGGCCGA GTTCCGAGCC ATTACCCTCT GAAATGGCAT TAAGATCAAT GCAATCATTG 
GGTATTCAGC TACTCAGCGA AGTGAAAACG CTCGAGGCCA ATTGCTTGCT GCAACTGCGC 
CATTTAGACA ACGACGCTAA GGTGGTGGTG GACTTTTTAA AGCTGCAATC CCGCAAAGTG 
GATTTAGTAC TGCAGCATGT ATTAGAGAAA GAAACTCAAG AAGGCGAAAA ATTCATTGGC 
AATCAGTTTG GTGGCAGCGG CCTAAGACTG ATCACGCCCA CAGCCTTAAC CATCGGCTCA 
AACTATAAAA TCACCCTGTT TATTCACGAC GAGCTAGTCG CTATTCTCTG TTTTGGCAAA 
GTGACCACCT CTACCGCGCA AAAAATGCTA TCTGCCGAGA GCAGCGCCAA TCGAGATACT 
AATAGCGGTG ACACACAAAG CCCCGAGTTC AATACTCAGG CGGAACTTCA GTCTCCTGCC 
ACGCAATGGC AAACCGACTT TGAATTCAGT CAAATTCTCG AAGCTGACGT GGAGCAATTA 
GTCAAAGCCA GCCTCAATGT GCAGCAGAAA CAACTCAAGT TACGTAAACT CGCCAGAGAC 
GAGCGTCAAT AG
 
Protein sequence
MFTDTNPYFS VPHPFTAYLS LWPSSEPLPS EMALRSMQSL GIQLLSEVKT LEANCLLQLR 
HLDNDAKVVV DFLKLQSRKV DLVLQHVLEK ETQEGEKFIG NQFGGSGLRL ITPTALTIGS 
NYKITLFIHD ELVAILCFGK VTTSTAQKML SAESSANRDT NSGDTQSPEF NTQAELQSPA 
TQWQTDFEFS QILEADVEQL VKASLNVQQK QLKLRKLARD ERQ