| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2352 |
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| Symbol | |
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| ID | 5370555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2807893 |
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| End bp | 2809275 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640830566 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001366553 |
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| Protein GI | 153000872 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.138408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAGCG ATGTTTCTTG GCAGCGATTT AAGCAATTTC CGCGCTTGAT GTGGATATTT
TTGTTTGGGT CTTTTATCAC CCGTGGCAGT TATTACATGG TATGGCCATT TTTGGCCGTT
ATTTTATATG AGAAATTCGC GCTAAGTGCC ACTGAGGTCG GCATGGTCTT GTCCTGCGCC
GCGATTATTT CGGTATTTAC GAGCTTTGTT GGTAGCTCAT TGTCCGACAG AATAGGTCGT
CATAAGCTGA TGTACCTGAC GGGCATCCTC TATATCATCT CGTTTTCGTT ATTGGCTGAA
GCCAATTCTG TCGAGGGGTA TGTGGTTGTG ATGACCCTGT GCTCTATGGC CACGTCACTG
TGGCGACCGC TGACATCGGC GGCTATTGGC GACATCATTG CCGATCCTAA GACGCGCGAA
TTGGCGATGC AGTCGCTGTA TTTTATCGTC AACGTTGGCT GCGCCGTTGG CCCTATGCTT
GGGGTATGGC TTGGTCTTAC GGGCAAGCAG TCCAGTTTTT ACCTTACTGC AGTGGCCTTT
GCCGTGTTGT TAGCCTTGTT ATATTGGGGA TTTAACCATC AAACCCGTCA GGATGTTGCT
TTGGCGGCTG GCGCCTCATC GAATGACAAT TTAAGTGACG CTACGAGTGG TACTGAAAGT
GATGGTGCAA GTGGTAGTGT AAATGACATG ACAAGTGATG GTGTTAATCG TGGCGTGAAT
GGCTTATCGA GTGATACTGA GACGAGCACG AAAAAAGCGG CTGTCGTGAG CCGTAAGCAA
ATTGTCGCCA TTCTATTGCA AGATAAACTG CTGCAATGTT TAATTTTCGC CAATATTCTG
TGTATGTTCA TTTATGCCCA AATGGACAGT TCGTTGATCC AATATCTCAC TCGCGCTGGC
GCGCCTGATT TACTGACGTT AATCTCTGGC ATGATTTTCA CTAATGCTAT GGTGATTATC
TCAACCCAAT TTTTGCTATT GAAACTCATG GCCCGTTTTC CGCTCGTCAA ACGGATTCAA
ATCGGATTGC TGTTACTTAT CTGCTCACAA ATCTGGCTGG CATTTAATCC ACTGGATCTT
TTTTGGGGCT GGATAGGGGC AATTATGGTG ATGAGCGTCG CCGAGACGAT TTTGTTTCCT
ACTATGAATG TGCATATCGA CCGCTTAGCC CCTGACCATC TTCGGGGTGC TTACTTTGGC
GCCGCCTCAT TCTATGACTT AGGCTTTGCG CTCGCGCCCC TTGGCGGCGG TATTATATTG
GATCATTTTG GCGGTCAGTG GCTGTTTTTG ACGGGCGCCG CACTCTCGGT ATTGGTGATT
TATCTGTACA GCATTTTAGA TAGACTACCG CGACCCGATT TTTCCATGTT TAAAGCGGAT
TAG
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| Protein sequence | MHSDVSWQRF KQFPRLMWIF LFGSFITRGS YYMVWPFLAV ILYEKFALSA TEVGMVLSCA
AIISVFTSFV GSSLSDRIGR HKLMYLTGIL YIISFSLLAE ANSVEGYVVV MTLCSMATSL
WRPLTSAAIG DIIADPKTRE LAMQSLYFIV NVGCAVGPML GVWLGLTGKQ SSFYLTAVAF
AVLLALLYWG FNHQTRQDVA LAAGASSNDN LSDATSGTES DGASGSVNDM TSDGVNRGVN
GLSSDTETST KKAAVVSRKQ IVAILLQDKL LQCLIFANIL CMFIYAQMDS SLIQYLTRAG
APDLLTLISG MIFTNAMVII STQFLLLKLM ARFPLVKRIQ IGLLLLICSQ IWLAFNPLDL
FWGWIGAIMV MSVAETILFP TMNVHIDRLA PDHLRGAYFG AASFYDLGFA LAPLGGGIIL
DHFGGQWLFL TGAALSVLVI YLYSILDRLP RPDFSMFKAD
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