Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2349 |
Symbol | |
ID | 5371317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2804904 |
End bp | 2805176 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830563 |
Product | phosphotransferase system, phosphocarrier protein HPr |
Protein accession | YP_001366550 |
Protein GI | 153000869 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.1116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCTCAT CCACTATGTA CGAAAAATCT GTCACCATTA CCGCCAAACA TGGGATTCAC ACCCGCCCTG CAGCTTTACT GGTTAAAGAA GCCAAAACCT TTGACTGCGA TGTCATGGTC GAATGTAATG GTAAGCAAGC CAGCGCTAAG AGTCTGTTTA AGCTACAAAC TTTAGGGCTA TATTCTGGCG TCACGGTAAG AGTGTTTGCC GAAGGTGAAC AGGCACAAGC CGCGGTTGAG AAAGTCTCCG AGCTGCTGAT CACGCTAAGC TAG
|
Protein sequence | MSSSTMYEKS VTITAKHGIH TRPAALLVKE AKTFDCDVMV ECNGKQASAK SLFKLQTLGL YSGVTVRVFA EGEQAQAAVE KVSELLITLS
|
| |