| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2325 |
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| Symbol | |
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| ID | 5370089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2776721 |
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| End bp | 2777404 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640830539 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001366526 |
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| Protein GI | 153000845 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.988522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAGTC AAAGTGTTAT CGAACAACAA AACCCAGCTA AAACCCTTGC TAAGTCTGGG
CCGTATAGTA TTAAAGAAGA GATCGCTAAT AGCGTATCCC ATGGCTTAGG CGTCATCGCA
GGCATAGTGG CATTAGTACT GATGTTACTC AAAGGGCAAG ATCATCTAAC GCCAACTCAA
CTAACAGGCG TTGCCATTTA TGGTGCGAGC ATCATAGTGC TTTTTCTATG CTCGACCTTA
TACCACAGCG TTAGCCATTC AGGCTGGAAA CATAAACTTA AGATCGCCGA TCACTGCGCA
ATTTACTGCT TGATTGCAGG AACTTACACA CCTTTGATGC TGATAAGCCT ACAGGGGACG
CAATCGATAG TGATTTTAAC AGCGATTTGG TCGCTTGCGA TTGGTGGGAT CCTATTTAAG
ACGCTATTTA TTCACAAATT CAAAAAGTTA AGCTTAGTCT TGTATCTCGC CATGGGTTGG
CTATGTGTCA CTGTGATGGG CGATTTAACG GCGGCCATGT CGGAGTTAGG TTTTAATCTA
TTGATCTTAG GTGGGTTATT TTACACTTTA GGTGTTGTGT TCTACGTCGG GAAACGCATT
CCATTTAACC ATGCCATTTG GCATTTGTTC GTGCTTGGCG GTGCCATGAG TCACTTTCTG
TGTATTTATC TGACTGTTAT TTAA
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| Protein sequence | MSSQSVIEQQ NPAKTLAKSG PYSIKEEIAN SVSHGLGVIA GIVALVLMLL KGQDHLTPTQ
LTGVAIYGAS IIVLFLCSTL YHSVSHSGWK HKLKIADHCA IYCLIAGTYT PLMLISLQGT
QSIVILTAIW SLAIGGILFK TLFIHKFKKL SLVLYLAMGW LCVTVMGDLT AAMSELGFNL
LILGGLFYTL GVVFYVGKRI PFNHAIWHLF VLGGAMSHFL CIYLTVI
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