Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2323 |
Symbol | |
ID | 5370094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2772314 |
End bp | 2774437 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640830537 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_001366524 |
Protein GI | 153000843 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.16398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAGTT CAAACCAAAA CCCAGCTGTA GCTGCCAATG CGATAGAAAT CACAGCGCCA GAATCGACAA TCCCTAATAA ATCGACAGTG CCTAATAAAT CGGCTGAGTC TAGTCAATCA ATCGTGCCTA AGGCGCCGAG TCGCCGCGAA ACCCGCGCGC AGGCCCAAGC CTTTATCGAT ACGTTAGCGC CACTGCAACA TCCTAATTCA CAAAAGATTT ATCTCGAAGG TTCCAGTGCC GATATTCGCG TTGGCATGCG GCAAATTCTG CAGACTGACA CGCTTGTCGG CGGTACAGAT GATGCGCCCA TCATGGAAAA AAATCCGCCA ATTCGCGTGT ACGATTGCGC CGGACCTTAT TCCGATCCTG AGGCCGACAT CAATGTGCGT CTAGGCCTTG GTAAATTAAG ACAAAACTGG ATTCTAGCCC GCAACGATAC AGAGCAATTA CCCTGCGCGA CCTCAGATTT TACCCAACAA AGACTCGCTG ACGACGGTTT AGACCATCTG CGTTTTGAGG TGGGCTCGAG TGCCATTGTC CGCCCACGCA GAGCGCTGCA GGGCAAACGA GTTAGTCAAT TACACTATGC CCGTCAAGGG ATTATCACGC CCGAAATGGA ATATGTGGCG ATCCGCGAGA ACATGGCACT TGCGCAAGTA CAGGATGAAA TCCTCAATCG TAAAGCCAAG GGCGAAGCTT TTGGTGCCTT AGTCGGCGAA CCGATTACCG CCGAATTTGT CCGCGCCGAA GTTGCCCGTG GCCGCGCGAT TATTCCGCTG AATATTAACC ATCCCGAAGC CGAACCTATG ATTATCGGGC GTAATTTTCT GGTGAAAGTG AACGCCAATA TCGGTAACTC GGCGGTGACG TCTTCCATCG AGGAAGAAGT GGAAAAGCTT GTCTGGTCAA CCCGTTGGGG GGCAGATACT GTCATGGATT TATCCACGGG TCGTTATATT CACGAAACCC GCGAGTGGAT CATCCGCAAC TCACCAGTGC CCATCGGCAC AGTGCCGATT TATCAAGCGC TGGAGAAAGT GAACGGCGTG GCAGAGGATT TAACGTGGGA AGTGTTCCGC GATACCTTGA TTGAACAAGC TGAGCAAGGT GTTGATTACT TTACTATTCA TGCTGGTGTG CTGCTGCGTT ATGTGCCGAT GACGGCTAAA CGTGTTACTG GGATCGTTTC TCGCGGCGGT TCAATTATGG CCAAATGGTG CCTGAGTCAT CACAAGGAAA ACTTCCTCTA CAGCCATTTT CGTGAGATCT GTGAGCTTTG CGTCGCCTAC GATGTATCCC TGTCTTTAGG TGATGGTATG CGTCCCGGAT CGATTGCCGA CGCTAATGAT GCTGCCCAGT TTGCAGAGCT TGAAACCTTA GGTGAGCTAG TCAAAATCGC GTGGGAATAC GACGTACAAA CCATTATCGA AGGGCCGGGA CATATCCCGA TGCAGCTCAT TAAAGAGAAC ATGGACAAGC AGTTAGCTCA CTGCGATGAG GCGCCGTTTT ACACGCTTGG CCCGCAAATC ACTGATATCG CACCTGGGTA TGATCATTTC ACCTCCGGCA TAGGCGCGGC CATGATTGCT TGGTACGGCT GCGCTATGTT GTGTTATGTC ACGCCAAAAG AACACTTAGG ATTACCGAAT AAACAAGATG TTAAGCAAGG TTTGATTGCT TATAAGATTG CCGCCCACGC CGCCGATGTG GCGAAAGGTC ATCCGAGTGC GCAAATTCGT GATAATGCGC TGGCAAAGGC GCGGTTCGAA TTCCGCTGGG AAGATCAATA TAACTTAGGA CTCGATCCTG AAACCGCACG TGCTTATCAC GATGAATCTT TACCGCAGGA ATCCGCTAAA GTCGCGCATT TTTGCTCTAT GTGCGGCCCT AAATTTTGTT CGATGAAAAT CACCCAAGAT GTGCGCGCCT ATGCCGCTGG CTTAGAGGCG GCACAAGCGA AGGCGGAGCA AGTTGAAGCG GCTGCCCAAG CCATGCAAGT CACAGTCAAG ACGCCGCAGG AGTTGGAAGC GGCAATGGCG CTAAAATCGG CAGAGTTTGC TGCTTCGGGC GCCGAGATCT ATCACGTGAA AGACAAGCTT GTCGCCGAAG CTGAGGAAGC CTAA
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Protein sequence | MSSSNQNPAV AANAIEITAP ESTIPNKSTV PNKSAESSQS IVPKAPSRRE TRAQAQAFID TLAPLQHPNS QKIYLEGSSA DIRVGMRQIL QTDTLVGGTD DAPIMEKNPP IRVYDCAGPY SDPEADINVR LGLGKLRQNW ILARNDTEQL PCATSDFTQQ RLADDGLDHL RFEVGSSAIV RPRRALQGKR VSQLHYARQG IITPEMEYVA IRENMALAQV QDEILNRKAK GEAFGALVGE PITAEFVRAE VARGRAIIPL NINHPEAEPM IIGRNFLVKV NANIGNSAVT SSIEEEVEKL VWSTRWGADT VMDLSTGRYI HETREWIIRN SPVPIGTVPI YQALEKVNGV AEDLTWEVFR DTLIEQAEQG VDYFTIHAGV LLRYVPMTAK RVTGIVSRGG SIMAKWCLSH HKENFLYSHF REICELCVAY DVSLSLGDGM RPGSIADAND AAQFAELETL GELVKIAWEY DVQTIIEGPG HIPMQLIKEN MDKQLAHCDE APFYTLGPQI TDIAPGYDHF TSGIGAAMIA WYGCAMLCYV TPKEHLGLPN KQDVKQGLIA YKIAAHAADV AKGHPSAQIR DNALAKARFE FRWEDQYNLG LDPETARAYH DESLPQESAK VAHFCSMCGP KFCSMKITQD VRAYAAGLEA AQAKAEQVEA AAQAMQVTVK TPQELEAAMA LKSAEFAASG AEIYHVKDKL VAEAEEA
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