| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2274 |
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| Symbol | |
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| ID | 5370236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2710890 |
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| End bp | 2711711 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640830488 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001366475 |
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| Protein GI | 153000794 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000319086 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATG CTACGATGTT TAACTATCAA GGTAAGAATG TTGTCGTTGT CGGTGGCACC
AGTGGGATAA ATCTCGCCAT TGCAATTGCG TTCGCGCAGG CTGGCGCCAA TGTCGCAGTC
GCGAGTCGCA GCCAAGATAA AGTTGATGCC GCGGTATTGC AGCTGCAACA GGCCAATCCT
GATGGTATTC ATTTAGGTGT GAGTTTTGAT GTGCGCGATC TTAGCGCCCT TGAAGTCGGT
TTTGATAAAG TCGCTTCTGA GTTTGGTTTT ATCGATGTGC TAGTTAGCGG CGCGGCGGGT
AATTTCCCTG CCAGCGCCGC AAAGCTTTCG GCTAATGGTT TTAAGTCGGT GATGGACATT
GATTTGCTGG GCAGTTTTCA AGTGCTAAAG CAGGCTTATC CTTTGCTGCG TCGCCCCAAT
GGTAATATTA TCCAGATTTC GGCGCCGCAG GCTTCGATTG CTATGCCCAT GCAAGTTCAT
GTGTGTGCGG CAAAAGCGGG CGTGGATATG CTGACGCGAA CCTTAGCCTT AGAGTGGGGC
TGTGAGGGGC TGAGAATTAA TTCGATTATG CCAGGCCCCA TAGCAAACAC TGAAGGCTTT
AATCGCCTTG CACCCAGCGC CGCATTACAG CAGAAGGTTG CCCAATCCGT TCCATTAAAA
CGCAACGGCG CAGGTCAGGA TATTGCTAAT GCTGCGTTAT TCTTAGGCTC TGAATTGGCG
TCCTATATTA CGGGAGTTGT GCTGCCGGTT GATGGCGGTT GGTCACTTGG CGGCGCCAGT
ATTGCGATGA CAGAGCTTGG CGAACTGGCC GCAAAAATGT AG
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| Protein sequence | MFNATMFNYQ GKNVVVVGGT SGINLAIAIA FAQAGANVAV ASRSQDKVDA AVLQLQQANP
DGIHLGVSFD VRDLSALEVG FDKVASEFGF IDVLVSGAAG NFPASAAKLS ANGFKSVMDI
DLLGSFQVLK QAYPLLRRPN GNIIQISAPQ ASIAMPMQVH VCAAKAGVDM LTRTLALEWG
CEGLRINSIM PGPIANTEGF NRLAPSAALQ QKVAQSVPLK RNGAGQDIAN AALFLGSELA
SYITGVVLPV DGGWSLGGAS IAMTELGELA AKM
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