Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2234 |
Symbol | |
ID | 5371996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2660117 |
End bp | 2660416 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640830449 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001366436 |
Protein GI | 153000755 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.440847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGGCGG GTACTCGTTT GTCGCTGATG CGGGATAACT TAAGTTTGCC AGAGATGGCA GAAAAACTAT CGATGAGCCC AGCGACCTTA AAGCGCCGCT TGGCTGAAAT GGATTTAAGC TTTGGCCAAC TCGTCGATGA AAACCGTTTA ATCAAAGCCC TGTATTTTTT AGCCACACCT TCGCAGGACG CCCACACAAT TGCCAACTCA TTATCCTTCA GCGACGCCAG TAATTTCAGG CGTTCTTTTA AACGCTGGAC GGGCCAATTA CCCACCTATT TTCGCAGTTG GCTGGCTTAA
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Protein sequence | MAAGTRLSLM RDNLSLPEMA EKLSMSPATL KRRLAEMDLS FGQLVDENRL IKALYFLATP SQDAHTIANS LSFSDASNFR RSFKRWTGQL PTYFRSWLA
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