Gene Shew185_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2163 
Symbol 
ID5372814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp2580215 
End bp2580907 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content50% 
IMG OID640830378 
Producthypothetical protein 
Protein accessionYP_001366368 
Protein GI153000687 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.434143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGAGT ACAATGTCAC TGGGGCTTTT CTGGTAGGTC TCATGGGCGC CGCACATTGC 
TTTGGCATGT GTGGCGGTTT AGTGGGCGCT TTCTCAGCCC AAATCCCCAA TGGCAAAACA 
GGTAATCTGC TGGCGCATCA GCTTAAATAT TTACTGAGTT ACAATCTTGG ACGTATTTTG 
AGTTACACCT TAGCGGGCGC CTTAGTGGGC GCTTCGGCGG CAGGTCTTGG TCACTTATTT 
GAACTGGATA CGTATTTGAT TGTGCTGCGC ATCATTGCCG GACTGATGAT GATCGCAACT 
GGGCTGTATA TCGCCAAAAT TTGGGTTGGA ATAGTGCAGA TTGAGCGCGT CGGTCAATGG 
TTATGGCGAT ATTTAAAACC CATAGCGCAA CGCCTTGTGC CCATCCAAAA TCCGAGCCAA 
GCGGTCATGG CGGGATTCAT TTGGGGCTGG CTGCCCTGCG GCCTCGTCTA TAGCACCTTA 
ACTTGGTCGG TTGCATCTGG CTCTGCCAGC CAAGGTGCCT TGATTATGTT GGCCTTTGGA 
TTAGGCACCT TACCCGCCCT ATTGAGTGCT GGTGTTGCGG CAAAACGCCT CGCTGCTTGG 
GTTCAACAGA AAACCGTTAG ACTATTGAGC GGCTTACTGT TAATTGCGTT TGGTGGTCAA 
ACTTTATATA TCGCACTCGC GCAGCTAAAC TAG
 
Protein sequence
MIEYNVTGAF LVGLMGAAHC FGMCGGLVGA FSAQIPNGKT GNLLAHQLKY LLSYNLGRIL 
SYTLAGALVG ASAAGLGHLF ELDTYLIVLR IIAGLMMIAT GLYIAKIWVG IVQIERVGQW 
LWRYLKPIAQ RLVPIQNPSQ AVMAGFIWGW LPCGLVYSTL TWSVASGSAS QGALIMLAFG 
LGTLPALLSA GVAAKRLAAW VQQKTVRLLS GLLLIAFGGQ TLYIALAQLN