Gene Shew185_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2050 
Symbol 
ID5373747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2459854 
End bp2460951 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content49% 
IMG OID640830254 
Producthypothetical protein 
Protein accessionYP_001366255 
Protein GI153000574 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACGAC TGATACGCCC TACTTTCGTT CCGATTCTAG TACCGATTTG GCAGCGTTGG 
TTAGCAAGGC GTTTGCCACC GAGTCCTGAA ATCACCTTAA GCCATCGCAG CATTTTTATT
TTGCCGAGCG GTTTTGGCTT AGTTTGGCTC GGGTTGGTTT TACTCTTATA TCTATTTGGC
ACTAACTATC AAAATAACTT AGTCATTGGC CTTAGCATCT TACTCCTAAG CCTCTTTAAT
ACCTGTATTC TCTACAGTTA CAAAAATCTT GCCGGTCTAC ATTTACGCGC CATGACGCCG
CCCGAAGTCT ATGCGGGAGA GACCTTAACC TTTCCGGTTC TCATCAGCAC CCATCACAGT
GGCCATAATA TTCAGCTTAA CTATCCGCAT AATCGCACTT ATACGGTGCA GAACATCGGC
ACAGATGAAC AGCAAGCGCT CGTGCCCTTC GAATATCATC AGCGGGGCCA AGTGTCACCG
GGTCGGCTCA AAATTGAATC CTTCTATCCC TTAGGGCTTT GCCGCGCATG GTCCCATGTG
GATTTGGCCA TTAGTCACTT AGTCTTTGCC CAGCCGATTG AAGCGCCGCT GCTGCTTGAG
GCTGATCATA CTCAGTCTGA GCAAGATCCC CTGCTACTGG CGGGTAAACA TGTGTCAGGC
ATCGATGAGT TTAAAGGACT TAAACCCCAT GTGCTCGGCG AGTCCCTCAA GCAAGTGGCG
TGGAAACAGT GGGCGCAGGG TCGCGGTATG TTAAGTAAAG AATTCCAGCA GCCCCAAGGC
GATCCCGTCT GGTTAAGACT CAGACCCGAT GCTAAACGGC TCGAAACCCA GTTGAGTCAA
TTAAGCTGGC AAATCAATAA ACTCACGCAA CTCGAGCAAT ATTTTGGCCT ACATCTGCAA
ACACCCATGG GCGAGGATAT CCTGATCGCG CCCTCTATCG GTCATAACCA TAGAATAGCC
TGCCATAAGG CCCTTGCCTT GTATCCAAAG CTTGCGCCGT CAGCCGTTAA TTCGTCGTCA
GCGGCAAAGC ACTCAAATAA AATGGCTAAA ACCACCAGCA AGCAGCGTCA TATCCCGACC
TCGAGGGAAC AGGTATGA
 
Protein sequence
MKRLIRPTFV PILVPIWQRW LARRLPPSPE ITLSHRSIFI LPSGFGLVWL GLVLLLYLFG 
TNYQNNLVIG LSILLLSLFN TCILYSYKNL AGLHLRAMTP PEVYAGETLT FPVLISTHHS
GHNIQLNYPH NRTYTVQNIG TDEQQALVPF EYHQRGQVSP GRLKIESFYP LGLCRAWSHV
DLAISHLVFA QPIEAPLLLE ADHTQSEQDP LLLAGKHVSG IDEFKGLKPH VLGESLKQVA
WKQWAQGRGM LSKEFQQPQG DPVWLRLRPD AKRLETQLSQ LSWQINKLTQ LEQYFGLHLQ
TPMGEDILIA PSIGHNHRIA CHKALALYPK LAPSAVNSSS AAKHSNKMAK TTSKQRHIPT
SREQV