| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2035 |
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| Symbol | |
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| ID | 5371487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2428205 |
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| End bp | 2430415 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640830239 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001366240 |
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| Protein GI | 153000559 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTAC TGTCCAAAGC AGCGAAAGCC CCGCAGCGCC GACAGTCGCG GCATTCATCA
CTCAATTTAT GTCTACAGTC TTTGTTTAAT GCCTCTTTAT CTAGTGCAGC TTTATTAACT
GCCTCGCTTT TTTGCTTATC GGCAAATGCA TCGGCGCAGG CGCTTGATAA TGAGTTACAG
CCAAAGTCTG AGAGTGAGGT TATGACGCTA AAACCTGTGG TATATCAGAC TTTTACTCGC
CTTTATGGCA ATAAAAACCC AACGAATAAA CCTTGGGGCA CGATTGCCGA CAACGGTGTC
GGCAAATTTA ATGATATCGA CGATGTTGCA CTCAATAGCA TCAAGGACCT AGGCGTCACC
CATGTGTGGT ACACAGGCGT TCCACACCAT GCCTTGATTG GTGATTACAG CGAGATTGGC
GTAAGTGCAG ATGATCCCGA TGTGGTCAAA GGCCGCGCAG GATCACCCTA TGCAGTCAAA
GATTACTACA ACGTCAACCC CGATCTGGCG GTCAACCCCG CCAACCGTTT AGCCGAGTTC
GAAGCGCTGA TTGCCCGTAC CCATCAACAC GGCTTAAAGG TGATTATCGA TATCGTGCCA
AACCATGTGG CGCGCCATTA TCAATCAGTT AGTAAACCCC AAGGCGTGCG CGATTTTGGC
GAAGATGATA CCAGTCTGGA GTACGCCAAA AACAACAACT TCTATTACGT CGTTGATAAC
AGTGTGAAGG GAACGAAAGG ACAAGCGCAT GCCTTTGAGG TGCCAAGCTT ACCCGCAGAG
CTTAAACCGC TGGGCGGAGA AACTCACCCC TTAAGTGACG GTAAATTCGA CGAATTTCCC
GCAAAGTGGA CCGGCAATGG CTCACGCTTA GCCAAGCCCG ATGCTAATGA TTGGTACGAG
ACAGTTAAGA TTAATTACGG CGTGCGCCCC GATGGCACCT ATGACTTCCC TCGCCTGCCA
GCCAAATTCG CCACTTTTAC TGAAGCGCAG CATTACGCTT TCTGGCAACG ACATTTAGCC
GAGATCCCAA GCTCTTGGAT TAAATTCAAT CAGATTGCCC AATATTGGCT TGAAAAAGGA
GTCGATGGGT TTCGATACGA TATGGCCGAA ATGGTGCCAG TGGAGTTTTG GAGTTACCTC
AACAGCCAGA TAAAACACAC TAATCCCGAT GCCTTTATCT TGGCCGAGGT CTATAACCCT
AAGTTGTACC GAGATTATAT CCAGCTTGGA AAAATGGATT ATCTGTACGA TAAGGTCGAT
CTTTACGACA CCCTAAAAGC CGTGATGGCG GGTAAAACCA GCACAGCTAA TATCGCGGCG
GATCAGGCAA AAGTGCACGA TATTGAATCC CACATGCTGC ACTTTTTAGA GAACCACGAC
GAGCAACGTA TTGGTAATGC AGCATTTTTA GCATCGCTAC AAACGAATAA ACCAACGAAT
AGCTCCCTAG AGACCCAAGC CGTAAATCCA AACTACGCCC TGCCAGCCAT GGTCGTGTCG
GCAACGATAG GCACTTCACC AACGTTAGTG TATTTTGGCC AAGAAGTGGG AGAAGCCGCC
ATCGAAAATC CAGGCTTTGG TCACGCATCA CGCACCAGTA TTTTTGACTA TGTTGGTGTC
CCCGCCCATC AGCGCTGGAT GAACAATGGC AAGTTTGATG GTGGACAATC AACGACGCAG
GAAACCTCGC TGCGGGCTTA CTATCAAAAA CTATTAACTT TAAGCACAGG CCAAACGGCG
CCTGCACTGT TAGGCCAATA TTATTCACTC GATGCCGCGA ATCGCAGTAA AAATGATGCG
ACTGAAAGTA ACAGCACTCA AAATATGAGT ACTCAAAAGA GCACTGCAAA CGAAACAGGC
TATGACGACA GCACCTTCGC CTTTGCCCGC TTCGAGGTGA TATCTCCGAC CTCAAAGCAG
ACTCAAAAGT TGATTGTAGT CAGTAACTTC AGTCAGACCG AATCAAAAGC CTTACAGCTC
AAGCTCCCCA AAGAGCTCAT CCGTCAGTGG CAATTAAAGG ACGGCGTATA TCCGCTTAAG
GATTTACTCG AAGATCATCA AACAAGCCAG CTGCAGCTTG AACAAGGCGA AGGCAAGATA
GCGCTCACCC TAGCCCCGCT GTCGTCGGCG ATTCTATCGC TCACCGTTGT AGCAGATGAG
CGGAAAAGTG GGTCCGCGAG TAAGCAACTG AATGAGCAAG CGGCCAAATA A
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| Protein sequence | MALLSKAAKA PQRRQSRHSS LNLCLQSLFN ASLSSAALLT ASLFCLSANA SAQALDNELQ
PKSESEVMTL KPVVYQTFTR LYGNKNPTNK PWGTIADNGV GKFNDIDDVA LNSIKDLGVT
HVWYTGVPHH ALIGDYSEIG VSADDPDVVK GRAGSPYAVK DYYNVNPDLA VNPANRLAEF
EALIARTHQH GLKVIIDIVP NHVARHYQSV SKPQGVRDFG EDDTSLEYAK NNNFYYVVDN
SVKGTKGQAH AFEVPSLPAE LKPLGGETHP LSDGKFDEFP AKWTGNGSRL AKPDANDWYE
TVKINYGVRP DGTYDFPRLP AKFATFTEAQ HYAFWQRHLA EIPSSWIKFN QIAQYWLEKG
VDGFRYDMAE MVPVEFWSYL NSQIKHTNPD AFILAEVYNP KLYRDYIQLG KMDYLYDKVD
LYDTLKAVMA GKTSTANIAA DQAKVHDIES HMLHFLENHD EQRIGNAAFL ASLQTNKPTN
SSLETQAVNP NYALPAMVVS ATIGTSPTLV YFGQEVGEAA IENPGFGHAS RTSIFDYVGV
PAHQRWMNNG KFDGGQSTTQ ETSLRAYYQK LLTLSTGQTA PALLGQYYSL DAANRSKNDA
TESNSTQNMS TQKSTANETG YDDSTFAFAR FEVISPTSKQ TQKLIVVSNF SQTESKALQL
KLPKELIRQW QLKDGVYPLK DLLEDHQTSQ LQLEQGEGKI ALTLAPLSSA ILSLTVVADE
RKSGSASKQL NEQAAK
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