Gene Shew185_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1870 
Symbol 
ID5371131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2230736 
End bp2232190 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content41% 
IMG OID640830073 
Producthypothetical protein 
Protein accessionYP_001366076 
Protein GI153000395 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.649407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAG TCCAAATAGC CGGAGCAGGT GCTGGTAAGA CTCACGGCCT AGCTGAGAAG 
ATCATCAAGC ACTATGATGC TTCGTCATAT AAGAAGATCT TTGCCATCAC TTATACCAAT
AATGCTGCGA AGAACATTTC CGAAGCTATC ATCAAGCAAT TTGGATACTT GCCAGAAAAT
ATCATAGTTT GCACTGTTCA TACGTTCCTA TTGAATGAGA TCATTTACCC TTACTCTCCG
TTTGTTCTAA ATGAAATACA CACCACCTCC TCTCGATGCA AAACATTCTC AAACTTTCCG
CCTGGCAAGT CTGAGGAAAA AAAACGACGA GAATCAGCGG GCACAATTAG CAGGCTAAAG
AAGATTGGCG TGATACATGT CGATGAGACA TATGCTGCGG CATGGAGAAT TGTCGATGAA
AACTACTCCA AACATAGCAG CCAGAAAAAG AAGTCTAAAG TTAGGAAAGT TCACAAGTTA
CTAAGTAGCG CGATTGATAA GATTTTTCTC GACGAAGCTC AGGATCTTGA TGAAACAGCT
CTTAAGGCTT TTCAACAAAT CGGCGAGAAT TCGGTTGACA TTTACATGGT GGGTGACCCC
AAGCAAGCAA TAGATTATCC AACATCTTTC ACAGAGTGGT TAGCTGCGAA TAAAGCCAAC
GAAAAAGTTA AAGTACTTCC GAATATAACT ACTTCTCGTA GGGTTCCACA GAGAATTCTT
GACCTCTCAA ACACCTTTTG CCCCAAAGGC CAAGAGCAAA CTAGCTTGTC TGAAGTTGAA
GGACGCCTAA CATACATCAC TTCTGAAGAT GATCATTACG ACGACGTTCT CTGTCATCAC
ATTGAGAATA GAAGTTTAGT GAGCATCTTC AGAAAAGAAG GTAATTACTC AACCAAACAA
GCAGGGTCAC TACCCGAGTT TGATCCTGAG GTAGAAGAGC TACTTACAGT AAAGTTTCCC
GAATACGAAG AAGGCGTGGT CATATATTCA TTACAGCGTT TCTTTACCTC CCTGTTATCC
AAGAATGACA ACAACAAATC TATACGTAAA TTTCTTGCCA AGCTGGAAAT TCCGTATGAC
AAAGAGCTGT TCATAAAACT TTGCCGCTCA GCCGAGCAAT TTAGTTCATC TAAGGACAAT
TCGGCCAAGT ATGCAATAAG CAACATCCAA CGAACTAAGG GCTTAGAGTC TAAGGTTTGT
GTCTTAATCT TAACGCCAGC GATATTCAAA TGCTTAATGC AGAATGGTGT AACCAAGTTC
AACAAGACTT GGAATATGGT CTACGTCGCA TTAACGAGAG CTGAGTCAGA GCTTGTTGTA
GCAGTAGACA TGGCTTTGCT TGGCAGAGGG TATAAGCATG ATGATATTGT TGAGAGCCTT
GAATCTATTG GGTTTGAAGT GCTAAACCCG AATCTACCAA ACCACAAAAC CGAAGAAAAA
TTAGAGGAAG CGTAA
 
Protein sequence
MIEVQIAGAG AGKTHGLAEK IIKHYDASSY KKIFAITYTN NAAKNISEAI IKQFGYLPEN 
IIVCTVHTFL LNEIIYPYSP FVLNEIHTTS SRCKTFSNFP PGKSEEKKRR ESAGTISRLK
KIGVIHVDET YAAAWRIVDE NYSKHSSQKK KSKVRKVHKL LSSAIDKIFL DEAQDLDETA
LKAFQQIGEN SVDIYMVGDP KQAIDYPTSF TEWLAANKAN EKVKVLPNIT TSRRVPQRIL
DLSNTFCPKG QEQTSLSEVE GRLTYITSED DHYDDVLCHH IENRSLVSIF RKEGNYSTKQ
AGSLPEFDPE VEELLTVKFP EYEEGVVIYS LQRFFTSLLS KNDNNKSIRK FLAKLEIPYD
KELFIKLCRS AEQFSSSKDN SAKYAISNIQ RTKGLESKVC VLILTPAIFK CLMQNGVTKF
NKTWNMVYVA LTRAESELVV AVDMALLGRG YKHDDIVESL ESIGFEVLNP NLPNHKTEEK
LEEA