| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1807 |
|---|
| Symbol | |
|---|
| ID | 5369514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2166740 |
|---|
| End bp | 2167570 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640830010 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001366013 |
|---|
| Protein GI | 153000332 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAATAA GACAGTTGTA TCGTCTACTC TTTAGCTTCG TCTTAGGGAT CAGCGTAATT
TCGGCCGCAA TCGCCCAAGA TAACAATCAG TCGCCCACAG CACCTAATAC AATAGTACCC
AATACAATAC CGACCATTCA TGTCGGTGGT TATCAATTTT CTCCCTATGT GAATCTACAA
CAGGACGGCC GCTACACAGG CCTCACCCTT GATATCATTA ATGCATTGAA TCAAATACAA
CAAGAAGTGT TTTTTGAATT TACCGTCACC AGTGTTGAGC ACAGATATAA AGCCTATGCC
TTAGGTCGCT TCGACATGAT GATATTTGAG AACCCCGCTT GGGGATGGCA GAAAATAGCG
GATCAGTTTA TTCCACTACA CATGATAGAT GGGGAAGTGT TTATTGCGCT TAAGGCCAAA
GCCCATAATC AAAATTATTT CAAAAACTTA ACCAATAAGT CAGTCGCATT CGTTAAGGGC
TATCACTATC AGTTTGCCCA CTTTGAAACC GATGCTGACA AGTTGGCAAA GCAATTTCGC
CCCTTGTTCG TCAGTAACAA CAGGGCCTCT ATCGAAAGTA TTCTGCGCGA ACGGGCAGAC
ATAGCGCCCG TCACTCATTC CTATTTGCAG TATTATTTAA AGGTGAATCC ACAAGACAGG
CATTTACTTT TAATCTCAGA CAAATGGGAC CAAGAGTACG ATAACGGCAT CTTACTTAGC
CTCAGATCAT CACTCGATGC TAAAAAGCTT TCACACTGGG TTCAGCTGCT TATCGACAAT
GGTAAACTGG CCGAACTCGC CGCCCAATAC GGGATTAAGT CGAGCCAATA A
|
|---|
| Protein sequence | MVIRQLYRLL FSFVLGISVI SAAIAQDNNQ SPTAPNTIVP NTIPTIHVGG YQFSPYVNLQ
QDGRYTGLTL DIINALNQIQ QEVFFEFTVT SVEHRYKAYA LGRFDMMIFE NPAWGWQKIA
DQFIPLHMID GEVFIALKAK AHNQNYFKNL TNKSVAFVKG YHYQFAHFET DADKLAKQFR
PLFVSNNRAS IESILRERAD IAPVTHSYLQ YYLKVNPQDR HLLLISDKWD QEYDNGILLS
LRSSLDAKKL SHWVQLLIDN GKLAELAAQY GIKSSQ
|
|---|
| |