| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1751 |
|---|
| Symbol | |
|---|
| ID | 5371543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2109750 |
|---|
| End bp | 2110802 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640829954 |
|---|
| Product | biotin synthase |
|---|
| Protein accession | YP_001365957 |
|---|
| Protein GI | 153000276 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0502] Biotin synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00433] biotin synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGT TGCAAGTTCG TCATGATTGG AAGCGGGAAG AAATCGAAGC CTTATTTGCG
CTGCCGATGA ATGATTTGTT ATTTAAAGCC CACAGCATTC ACCGTGAAGT GTACGATCCC
AATGAAGTGC AAATTAGCCG CTTGTTATCG ATTAAAACCG GTGCTTGCCC TGAGGATTGT
AAATACTGCC CGCAGAGCGC CCGTTATGAC ACAGGTCTAG AGAAAGAGCG CTTGCTGGCA
ATGGAAACTG TGCTGACCGA AGCGCGCAGC GCTAAAGCCG CGGGGGCTTC TCGTTTCTGC
ATGGGTGCCG CTTGGCGTAA CCCCAAAGAA AAAGACATGC CGTACCTTAA GCAAATGGTA
CAAGAAGTCA AAGCCTTAGG CATGGAAACC TGCATGACGC TCGGCATGCT TTCTGAAGAT
CAAGCGAACG ATTTAGCCAG CGCAGGCTTA GATTATTACA ACCATAATTT AGATACCTCG
CCTGAATACT ACGGCGATGT GATCACCACA CGTACCTATC AAAATCGTTT AGATACACTG
ACAAATGTGC GCGCCTCAGG CATGAAAGTG TGCTCTGGCG GGATTGTCGG CATGGGTGAA
AAGGCGACGG ATCGCGCAGG TTTACTGCAA CAGCTGGCCA ATTTACCCCA GCATCCTGAT
TCAGTGCCGA TCAATATGTT AGTCAAAGTG GCGGGCACGC CGTTTGAGAA GCTTGACGAT
CTCGATCCAC TCGAGTTTGT GCGTACTATT GCTGTAGCGC GTATTTTAAT GCCACTTTCG
CGCGTGCGTT TATCGGCTGG CCGCGAAAAT ATGAGTGATG AACTGCAGGC CATGTGTTTC
TTTGCTGGCG CCAACTCGAT TTTCTACGGT TGCAAATTGC TGACTACGCC AAACCCAGAA
GAAAGCGATG ATATGGGGCT ATTCCGACGT TTAGGTTTAC GTCCAGAGCA GGGCGCAGCG
GCAAAATTGG AAGAAGAAAG TGCAGTATTA GCCAAAGCAG CAGCCTATCA AGATAAGTCA
TCGGCACAAT TCTATGACGC GGGTGCTTTG TAA
|
|---|
| Protein sequence | MSQLQVRHDW KREEIEALFA LPMNDLLFKA HSIHREVYDP NEVQISRLLS IKTGACPEDC
KYCPQSARYD TGLEKERLLA METVLTEARS AKAAGASRFC MGAAWRNPKE KDMPYLKQMV
QEVKALGMET CMTLGMLSED QANDLASAGL DYYNHNLDTS PEYYGDVITT RTYQNRLDTL
TNVRASGMKV CSGGIVGMGE KATDRAGLLQ QLANLPQHPD SVPINMLVKV AGTPFEKLDD
LDPLEFVRTI AVARILMPLS RVRLSAGREN MSDELQAMCF FAGANSIFYG CKLLTTPNPE
ESDDMGLFRR LGLRPEQGAA AKLEEESAVL AKAAAYQDKS SAQFYDAGAL
|
|---|
| |