Gene Shew185_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1616 
Symbol 
ID5371364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp1954704 
End bp1955366 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content44% 
IMG OID640829816 
Productprimosomal replication protein N'', putative 
Protein accessionYP_001365826 
Protein GI153000145 
COG category[L] Replication, recombination and repair 
COG ID[COG3923] Primosomal replication protein N'' 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.249114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACACCC AACAATTATT GGTGATGCTG AAAAATCAGC TCAAAGCGCT AGAGCAAGAA 
GTACTGCAGC ACGATAATCG ACTCGCGCCG CCTCAGCGTA AACTCCTGCA AGAAACGGAG 
CGCTTCAATC ATTCGCTATT TGTCCAACAC GGCGCCCAAC TCGGCCCTTG TATTGAACAA 
ATTCGTAGCA GCATTATACA GCTCGAAAAA CAAATTAAGC TCAAACTCGC CCCCCAGACG 
ATTGCCCTCA GCTGTGAGCG GATCCAAGAC AGATTCACCG CCGTCAAACG GGCCTTGCTG 
ACGACCTCTA TCGACATTAA GTCCAAGACT CAGCAACGTG CCAGTAGCCG CGCCCGTTTT 
GCTCAGCGTC AGAATCAGTC TCACCAAGCC AGTGGTTTCG ATTGGATCGC CAATAACGTG 
ATGCAAAATA GTCACGAGAT CTATGAAGAA TTGAACAAAC ACCTGAATTG GGCGAAAAAA 
TTTGAACAAA AAATTGAAGA AATGGAATCA AAACTTGAAA ACTGTCATAG TGCTGACAAA 
ATAAAATTGC AAAATGACAT CCTTTTGATG CATCGTCGTC TAGGAAAATG CAGGCAAGCT 
ATTAGTTATA TAGAAGATCG CATTCAAATA TTCGAACGTC CGTATCAGAG TAATAATCGT 
TAA
 
Protein sequence
MNTQQLLVML KNQLKALEQE VLQHDNRLAP PQRKLLQETE RFNHSLFVQH GAQLGPCIEQ 
IRSSIIQLEK QIKLKLAPQT IALSCERIQD RFTAVKRALL TTSIDIKSKT QQRASSRARF 
AQRQNQSHQA SGFDWIANNV MQNSHEIYEE LNKHLNWAKK FEQKIEEMES KLENCHSADK 
IKLQNDILLM HRRLGKCRQA ISYIEDRIQI FERPYQSNNR