Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1592 |
Symbol | tig |
ID | 5373080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1928846 |
End bp | 1930150 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640829791 |
Product | trigger factor |
Protein accession | YP_001365802 |
Protein GI | 153000121 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000981502 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTTT CTGTTGAAGC AACCCAAGGC CTAGAGCGTC GCCTGACCAT TTCTGTTCCT GCTGAACAAA TTGAAAAGCT GGTTAAAGAC AGTTTACAAC GTGAAGCTAA GCGTGCTCGT ATCCCAGGTT TCCGTCCTGG TAAAGTGCCT ATTACTGTGA TTAACAAACG TTACGGCGCA GCGATTCGTC AAGACATCAT GGGTGAAGTG ATGCAACGTA ACTTCATCGA AGCAATTATT GCTGAGAAGT TAAACCCAGC CGGTGCACCG ACTTTTGTCC CTGGTTCAAC TGATGGCGAA AAGTTCGAAT TTATCGCTAC CTTTGAAATC TATCCAGAAG TTGAGCTGAA AGGCTTAGAT GCAATCGAAG TAGAACAACC AAAAGCTGAA GTGACTGATG CTGACGTTGA CACTATGATT GAAACGCTAC GTAAACAACA CGCAACTTTC GCTGCTGTTG AACGTGAAGC TGCCGATGGC GACAAAGTGA AAATGAACTT TGTTGGCTCA GTTGACGGTG AAGAATTTGA AGGCGGCAAA GCTGACGATT TCGAACTGCA ATTAGGTAGC GGCCGTATGA TCCCTGGTTT TGAAACGGGT ATTTTAGGTC ACAAAGCGGG TGAAGAATTT GTTATCGACG TGAACTTCCC AGAAGAATAT CACGCTGAAA ACCTGAAAGG TAAAGCCGCT AAGTTCGCGA TTACGTTGAC TGAAGTTCAA GCAGCTAACC TGCCAGAAGT AAACGATGAG TTTGCTGCTC TGTTCGGTAT CAGCGAAGGT GGCTTAGAAG CCCTTAAAGC TGAAATCCGT AAAAACATGA ACCGTGAACT TGAGCAAGCG TTAAAAGCTA ACGTGAAAGA GCAAGTGATC AACGGTCTGT TAGCGAACAA TGACATCACT CTGCCAAAAG CACTGATTGA TGGCGAAGTT AACGTACTGC GTCAACAAGC AATGCAACGT TTTGGCAATC AAACGGCCAA CATGCCTGAA CTGCCAGCTG AATTGTTCAC TGAACAAGCT GCACGTCGCG TTAAAATCGG TCTGTTATTA GGCGAAGTCA TCAAGACTAA CGAACTGAAA GCAGAAGACG AACGCGTACA AGGCTTGATC GCTTCTATGG CTTCTGCCTA CGAAGATCCA AGTGAAGTTG TTGCTTATTA CAACAGCAAC AAAGAGCTGA TGCAAAACAT GCGCAACGTT GCTTTAGAAG AGCAAGCAGT TGAAGCACTG TTGAAATCTG CCAAAGTGAC CGAAAAAGAA GTCGCTTTTG AAGAATTTAT GAACAAGGCT ACTGGTCGCG CATAA
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Protein sequence | MQVSVEATQG LERRLTISVP AEQIEKLVKD SLQREAKRAR IPGFRPGKVP ITVINKRYGA AIRQDIMGEV MQRNFIEAII AEKLNPAGAP TFVPGSTDGE KFEFIATFEI YPEVELKGLD AIEVEQPKAE VTDADVDTMI ETLRKQHATF AAVEREAADG DKVKMNFVGS VDGEEFEGGK ADDFELQLGS GRMIPGFETG ILGHKAGEEF VIDVNFPEEY HAENLKGKAA KFAITLTEVQ AANLPEVNDE FAALFGISEG GLEALKAEIR KNMNRELEQA LKANVKEQVI NGLLANNDIT LPKALIDGEV NVLRQQAMQR FGNQTANMPE LPAELFTEQA ARRVKIGLLL GEVIKTNELK AEDERVQGLI ASMASAYEDP SEVVAYYNSN KELMQNMRNV ALEEQAVEAL LKSAKVTEKE VAFEEFMNKA TGRA
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