Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1528 |
Symbol | |
ID | 5371773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1848200 |
End bp | 1848919 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829725 |
Product | hypothetical protein |
Protein accession | YP_001365739 |
Protein GI | 153000058 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000247556 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAATC CGCTGCATAA CGCGTTACAT CGAGAGCGAA GTGGAGAGCT TAATCGGGGC CTAAGTCGAA GGCAGGATCT AAGCCTAAGT CGAGGACTAA ATCTAGATAT TAGCCGAGTG CTCAATAGAT ATTTAGCTGT GTTAGTGCTG CTGTTCACAG GCGCTTTAGG TCTTACAGGG TGCGTGACTG TGACGGATAA CGCGGCGCAG CCGCTGCGAA CCACAGTCGT GATGTCTGGC GATCTCAGTG AATTACCACC AACCGCCATG ACGTACACTT GGCATCCCAA GTTTCAAAAA ATTATCACAG ACAAGCGCTT AGAGCCGCAG CAAGTGTTGC AGCACATGCA AGATGTACTC GAACAGAGTT TGCAGAATAA GGGATATCGC TGGGTTGAAG ATCCACAACT GGCGGATTTT CAGGTCGGGT TTGGTGTCGC CATGGGCACT GAAATGAGCG ATGAGCAAAT TCTGGCGGTA ACAGGCTTGG TTGCTGGGCT TTCGACCGAC GGTGTGAACA CTAAAAAGTA TGACAAGGGC ACTGTGGTGA TAGCACTGTT TAAGCCGACT AAAATAAAGG GCGGCGGTGA CGAACCCATT TGGCGTGTCC TTGCCCAAGG CTTTGGCAAC ATTAAAAAGA TGGATGAGCT AACCGAAAAC TTCGACAGTC TTATTGCCAG CATGGTGGCC AATATACCAT CGGTTAATGT GGCACCTTAG
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Protein sequence | MINPLHNALH RERSGELNRG LSRRQDLSLS RGLNLDISRV LNRYLAVLVL LFTGALGLTG CVTVTDNAAQ PLRTTVVMSG DLSELPPTAM TYTWHPKFQK IITDKRLEPQ QVLQHMQDVL EQSLQNKGYR WVEDPQLADF QVGFGVAMGT EMSDEQILAV TGLVAGLSTD GVNTKKYDKG TVVIALFKPT KIKGGGDEPI WRVLAQGFGN IKKMDELTEN FDSLIASMVA NIPSVNVAP
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