Gene Shew185_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1478 
Symbol 
ID5370669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1786898 
End bp1787806 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content47% 
IMG OID640829677 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_001365691 
Protein GI153000010 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0012111 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAC ATCAAATTCG TAAAGCCGTT ATTCCTGTCG CAGGCCTAGG CACTCGTATG 
CTTCCAGCGA CCAAAGCGAT TCCAAAGGAA ATGTTACCGG TTGTCGATAA ACCATTGATC
CAATATGTGG TCAGTGAAGC TATCGCTGCT GGGATCAAAG AAATTGTCCT AGTGACCCAC
GCCAGTAAAA ACTCTATCGA AAACCACTTC GATACCAGTT TCGAATTAGA AGCCCAACTC
GAGCGCCGCG TTAAACGTCA GTTACTCGAA GCCGTACAAT CTATCTGTCC TAAAGACGTG
ACAGTGATCA GCGTGCGTCA ATCTCAGGCG AAAGGATTAG GCCACGCCAT TTTGTGCGCA
AAATCAGTAG TCGGCGATGC ACCATTTGCA GTATTGCTGC CGGATGTGAT CATCGATGAA
GCCAGCTGTG ATCTGCGTCG CGATAACTTA GCCGCTATGG TTGCGCTGTT TGATGAAACC
CAAGTGGGTC AAATCATGGT TGAAGGCGTG CCGCACAACG TCGTCAATCA GTACGGTATT
GCTGATGTGA ATGGCCATGA TTTACAACCT GGTGAATCTG AGCCATTAGT TGAATTGGTT
GAGAAACCAG CCGTGGATGA AGCGCCATCT AACTTAGCCG TTGTAGGCCG TTATGTGTTA
CCTGCCAGCA TTTGGCCACT ACTGGCTAAA ACCCCTGCAG GCGCGGGCGA TGAAATTCAA
TTAACGGATG CAATTGCTAT GTTAATGAAG CAAGAAACCG TGAACGCTTA TTATATGGAA
GGTAAGAGCC ACGACTGTGG TAACAAGCAA GGTTACATGC GTGCGAACGT TGAATATGCT
CTGCGCCACA GCGAAATCGG TGAAGATTTT GCACAATATT TAAAAACCGT TGTAAAAGGG
ATGAAGTAA
 
Protein sequence
MKQHQIRKAV IPVAGLGTRM LPATKAIPKE MLPVVDKPLI QYVVSEAIAA GIKEIVLVTH 
ASKNSIENHF DTSFELEAQL ERRVKRQLLE AVQSICPKDV TVISVRQSQA KGLGHAILCA
KSVVGDAPFA VLLPDVIIDE ASCDLRRDNL AAMVALFDET QVGQIMVEGV PHNVVNQYGI
ADVNGHDLQP GESEPLVELV EKPAVDEAPS NLAVVGRYVL PASIWPLLAK TPAGAGDEIQ
LTDAIAMLMK QETVNAYYME GKSHDCGNKQ GYMRANVEYA LRHSEIGEDF AQYLKTVVKG
MK