Gene Shew185_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1372 
Symbol 
ID5373497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1651599 
End bp1652450 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content46% 
IMG OID640829571 
Producthypothetical protein 
Protein accessionYP_001365585 
Protein GI152999904 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.601004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCTC TATTGATGAT TTTAGCCACA CAACTCCTAA TTGCCAGTGG CAACCTCTTG 
GTCAAGTTGC TTGAAAATGA TGCACCCGTG TTCCAACTGG TGCTCTACAG ACAACTCTTT
GCCACATTGC TAGTGCTGCC TTTTGTGTGG CGCTTGCAGG GTAATCTCAA ACTGAGCCCT
TATTACAAAG TGCATCTTGC CCGCGCCCTA TTGATTGGAC TCGGCAATGC CATTTTTATG
CTTGCCATTT TGCATCTTCC CCTCGCAACG GTAACCGCCG TGATTTATAC CTCACCTTTG
TTACTCCTCG TGCTTTCTGC GTTATTTTTG CATGAACGCA TAGGCTATCG ACGCTCAGTT
GCGGGGATCA TTGGTTTTAC TGGCATTTTA CTTATCAGCC AACCAACAGA GTTTAACCTG
TATATAGGTT TAGCCTTTTT CGGTGCCATG ACGTCGGCAT TGAATAGTTT GATTTTAAAG
GCCTATTCGA CCCATGAACA TCCTTTCTCT ATGCTCTTTT GGTCTAATGC CTTTGCGATG
ATATTTCTGA TACCGGCGAC CTTATACGAA GGCGCGGACT TTAGTTTACC AGTAGCACAG
GTGGGATTAA CGTTGGGACT ATTTTATATT GGCATGACCT ATCTCATCAT TCACGCCTAT
CGACGTGCCG ATGCGAGCCA AATGGCGCCT GTAGAATATA CCGGATTGAT TTTTGCGGCC
TTGTTAGGCT GGTGGATACT CGATGAAGAA CTCAGCCTAG TGATGTTGAT CGGTATCGGA
TTAGTCATTT TCTCATCCAT ATTGCCCAGC TACAGCGAGC TAAAAGCAAA ATGGAAAAGC
CGGCGAAGTT GA
 
Protein sequence
MQPLLMILAT QLLIASGNLL VKLLENDAPV FQLVLYRQLF ATLLVLPFVW RLQGNLKLSP 
YYKVHLARAL LIGLGNAIFM LAILHLPLAT VTAVIYTSPL LLLVLSALFL HERIGYRRSV
AGIIGFTGIL LISQPTEFNL YIGLAFFGAM TSALNSLILK AYSTHEHPFS MLFWSNAFAM
IFLIPATLYE GADFSLPVAQ VGLTLGLFYI GMTYLIIHAY RRADASQMAP VEYTGLIFAA
LLGWWILDEE LSLVMLIGIG LVIFSSILPS YSELKAKWKS RRS