| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1323 |
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| Symbol | |
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| ID | 5371979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1581672 |
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| End bp | 1584203 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640829522 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_001365536 |
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| Protein GI | 152999855 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACG AAAGCGAACT GAGCCAAAAT ACCAGCGAAA AACCCTTATC ATCCGCGCCA
AAAGCGGCGA GTAAGAAGGC GCCAGCTAAG CGTCAGGCCA AGCCTAAAGC CGTAGAACCC
TGTGAGCCCT GCGATGCCTT GCCCGCTTCC TTTGAGCGCC ATTTACGTTA TGGACTCAGC
CGTGGCGAAG GTGTGAGCTG CGAATTATTT CAAGCGTTGG CCTATAGCGT CAAAGAACAG
ATGCTAGACA ATTGGCGTCA GACCCGTGTG GATGACAGCC ATTTTCAGCG CAAGCAAGTG
GCGTATTTAT CCCTTGAGTT TTTGATGGGC AGGGCGCTGG GCAATGCACT GCTGAGTCTA
GATTTACAGC AAGATAGCCG TGATGCCTTG AGCAACTATG CAGTATCGCT GGAAGAGTTA
GAAGAAGCCG AACATGATGC CGGTTTAGGT AACGGCGGTT TAGGTCGATT GGCGGCGTGT
TTCCTCGATA GCTGCGCCAG TATGGACTTA TCCGTGACGG GTTATGGCAT ACGTTACGAA
TATGGCATGT TCGCCCAGAA GATAGTCGAC GGTTATCAGG TTGAGCGTCC CGACCGTTGG
CTGCGCGAAG GCAATCCGTG GGAAGTGCGC GTGCCGACCC ACAACGTGAC AGTGCCATTT
TTTGGTCACA CTGAATCCTA TGTCGATAAA CAGGGCCGCA GGCACATTAT TTGGGTTGAA
ACCCAAGATG TGCTCGCCGT CGCCTATGAC ATGCCAGTCC CCGGTTATCG CAATGGACGG
GTGAATACCC TGAGATTGTG GAAGGCCGAA GCGACCGATG ACTTTGATTT AGCTGAGTTT
AACCAAGGCG ACTACACAGA AGCCGTGGCC CGTAAAAACT TGGCTGAGCA GATCACTATG
GTGCTCTATC CCAATGATGC CAGCGAGAAC GGCAAAGAGC TGCGATTACG TCAGCAATAC
TTTTTATCCT CCGCCAGTTT GCAGGATTTA CTCAAACGTT GGGTGAGTCG CCATGGCCAT
GATTTCACCC AGTTTGCCGC TAAAAATGTG ATGCAGCTGA ACGACACTCA CCCTAGCATT
GCCGTGCCTG AGTTGATGCG GTTATTGATC GACGAATACG GTTTGGAATG GGACAGTGCG
TGGGCGATTA CCAGCCAGAC CATGGCGTAC ACTAACCATA CCCTATTGCC AGAAGCACTA
GAGCGTTGGC CCGTGCGCAT GATGGCGCAG ATGCTGCCAC GCATTTTAGA AATCATTTAT
GAAATCAACG CCCGCTACTT AGATTTAGTC GCCCACCATT GGCCGGGGGA CGCTAGTAAA
CTGGCGAGTA TGTCGATTAT TCAAGATGGC CCCCATCCAC ATGTGCGTAT GGCGTATCTG
GCGATTGTGG CGAGTTTTTC GGTCAACGGC GTCGCGGGTT TACACACGCA ACTGCTTAAA
TCTGGGTTGT TTAAGGATTT CTATGAGTTG TGGCCGCACA AGTTTAATAA CCGCACCAAT
GGCGTGACCC CAAGGCGTTG GCTTGCCCAT TGTAACCCTG CCTTAGCTAA GCTATTGACC
GCCCATTTAG GTAAAGAATG GGTGACAGAT TTAAGCCAGT TAACGGCGCT CAATGCCCTT
ACGCAGGACA CAGCGTTTAT CCAAAAATGG CGTGATGTGA AGCAAGCCAA CAAGGCTTTG
CTGGCGAAGA TGATTGCCAA GGAATGCGGC GTCGAGTTCG ATCCATCTAT GCTGTTTGAT
GTGCAAGTGA AGCGTATTCA CGAATATAAA CGTCAGCTAC TCAATATCTT ACACGTGGTC
CACCTCTATC ATCAGATCCA ACAAGGCCAC ACCGAAAACA TGGTGCCACG TTGCGTGTTG
ATCGGCGGTA AAGCGGCGCC CGGTTACTTT ATGGCTAAGT TGATCATCAA GCTCGCCAGC
AATGTCGCCC ATATGGTCAA TTCCGATCCT ATGGTGACGC CTTACCTACG TTTTGCTTTC
TTACCCAATT ACAACGTCAG CGCCATGGAA AAAATCTGCC CGGGAACGGA TTTATCCGAG
CAAATTTCGA CCGCGGGTAA AGAAGCATCG GGCACGGGCA ATATGAAGTT CATGATGAAC
GGCGCACTGA CGATTGGCAC TATGGATGGC GCCAATATCG AGATGTTAGA GGAAGTAGGC
TCAGAGAACT TCTTCCTGTT TGGACTCAAT GCGGAGCAGG TCTCAGAGGT ACGTAACCAC
TATCATCCAC GCAGCATTAT TGACGATTCA CCGGCGTTAT CTGAGGTGAT GAAGTTACTC
AAGAGTGGTC ATTTCAATCT GCTGGAGCCG GGGATTTTCG ATCCTATTAT TGCCGCCATC
GAAAGTAGCG ACGATCAATG GATGACGGCC GCTGACTTTG ACAGTTATCG AGTCGTGCAA
GAAGCCGTGG CGCGGGCCTA TAAAGATCCG CAGGTTTGGA CGCAGATGAG TATTCGCAAT
ACCGCCGCCA GCGGGCGTTT TTCGAGTGAT GTGACGATCG CGGGTTATCG CGATGAAATT
TGGAAACTGT AA
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| Protein sequence | MTDESELSQN TSEKPLSSAP KAASKKAPAK RQAKPKAVEP CEPCDALPAS FERHLRYGLS
RGEGVSCELF QALAYSVKEQ MLDNWRQTRV DDSHFQRKQV AYLSLEFLMG RALGNALLSL
DLQQDSRDAL SNYAVSLEEL EEAEHDAGLG NGGLGRLAAC FLDSCASMDL SVTGYGIRYE
YGMFAQKIVD GYQVERPDRW LREGNPWEVR VPTHNVTVPF FGHTESYVDK QGRRHIIWVE
TQDVLAVAYD MPVPGYRNGR VNTLRLWKAE ATDDFDLAEF NQGDYTEAVA RKNLAEQITM
VLYPNDASEN GKELRLRQQY FLSSASLQDL LKRWVSRHGH DFTQFAAKNV MQLNDTHPSI
AVPELMRLLI DEYGLEWDSA WAITSQTMAY TNHTLLPEAL ERWPVRMMAQ MLPRILEIIY
EINARYLDLV AHHWPGDASK LASMSIIQDG PHPHVRMAYL AIVASFSVNG VAGLHTQLLK
SGLFKDFYEL WPHKFNNRTN GVTPRRWLAH CNPALAKLLT AHLGKEWVTD LSQLTALNAL
TQDTAFIQKW RDVKQANKAL LAKMIAKECG VEFDPSMLFD VQVKRIHEYK RQLLNILHVV
HLYHQIQQGH TENMVPRCVL IGGKAAPGYF MAKLIIKLAS NVAHMVNSDP MVTPYLRFAF
LPNYNVSAME KICPGTDLSE QISTAGKEAS GTGNMKFMMN GALTIGTMDG ANIEMLEEVG
SENFFLFGLN AEQVSEVRNH YHPRSIIDDS PALSEVMKLL KSGHFNLLEP GIFDPIIAAI
ESSDDQWMTA ADFDSYRVVQ EAVARAYKDP QVWTQMSIRN TAASGRFSSD VTIAGYRDEI
WKL
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