| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1185 |
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| Symbol | |
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| ID | 5373495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1418530 |
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| End bp | 1421190 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640829383 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001365399 |
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| Protein GI | 152999718 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00253974 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTA TCGCATTGAG ACCCAAAACC TTTAGTTTGA GTTTATTGGC TGTGCTGACC
TGCGCCAGTT TAAGCGGATG CAGCAAAACA GAGCAGATAA AAGCAGCTGA CAGTCAGTCT
GTTAAGCCTA GTGATGTGGC CGCATCTAGC TCACCTAATA GCCCCAATGG TTACAGTATC
AATGGTAAGT CTACAGATAT TAATATTTGG CCGCAGTTAA CTATCCCCCA TAAAAATCAC
GAAGATGTTG AAAAACGCGT CGCAGATTTA TTGGCAAAAA TGACGCTAGA GCAGAAAGTT
GCGCAGATGA TCCAACCAGA GATCCGCGAT ATCACGGTCG AAGATATGCG CAAATACGGT
TTTGGCTCTT ATTTGAATGG TGGCGGTTCT TACCCGAACC AAGATAAACA TGCGACGCCA
GCAGATTGGA TTGCCTTAGC CGACGCTATG TATCAAGCCT CTATGGATGA CTCGCTCGAT
GGCATCAGTA TTCCAACCAT GTGGGGCACG GATGCGGTTC ATGGTCACAA CAATGTGATT
GGCGCAACAC TGTTCCCGCA TAATATAGGG TTAGGTGCGG CCCATCATCC TGAGCTTATT
CAGCAAATTG CTGCGATCAC CGCCAAAGAA GTCATGGTGA CGGGGATTGA TTGGGTATTT
GCACCGACTG TCGCTGTGGT GCGTGATGAC CGCTGGGGAC GAACCTACGA GGGGTATTCA
GAAGATCCTG TCATCGTTAA ATCCTATTCG CACGCGATTG TTGAGGGATT ACAAGGGGGC
AATGATAAAG ACTTCTTATC AGATCAGCAT GTTATCGCTA CTGTAAAACA TTTCTTAGGG
GATGGTGGTA CCGAAGGCGG GGATGATCAG GGCGATAATA TCGCATCCGA ACAAGCCTTA
TTTGATATTC ATGCCCAAGG TTATGTCGGC GGGTTAACTG CAGGCGCACA AACGGTAATG
GCCTCATTCA ATAGCTGGCA CGGCGCTAAA AATCACGGTA ATCCTTATTT ATTGACCGAT
GTACTTAAGG CTCGCATGGG CTTTGATGGC TTTGTCGTTG GCGATTGGAA TGGTCATGGG
CAGGTTGAAG GTTGCAGTAA CGAATCTTGT CCTCTGGCCG TTAATGCGGG CTTAGACGTA
TTTATGGTGC CTACGGCCGC ATGGAAACCC TTATATGAAA ACACTATCGC GCAAGTTAAG
TCGGGTTTGA TCAGCCAAGC GCGGATTGAT GATGCAGTGA GTCGTATCCT GCGCGTAAAA
ATTCGGGCGG GATTATTTGA AAAGCCAAGT CCTGCTAAGC GTCCTTTATC GGGTAAAACC
GAGTTGATTG GCCAAGCTAG CCACAGGGAT GTTGCGCGCC AAGCGGTGCG TGAATCATTG
GTATTATTGA AAAATAATCA GCATTTACTG CCGCTATCGC CCAAAGCTAA GGTACTCGTC
GCGGGTGATG CCGCCGATAA TATTGGCAAG CAATCGGGTG GTTGGTCTAT TACTTGGCAG
GGTACAGATA ACCAAAATGC AGATTTCCCT GGAGCGACAT CGATATATGC CGGTATAGCA
AAGGCGGTTT CTGCCAGCGG TGGTAGCGCT GTGCTGAGTG TTGATGGTCA ATTTGATGCT
GCGAATAAAC CCGATGTGGC GATTGTCGTA TTTGGTGAAG AGCCCTATGC CGAAGGGAAT
GGAGATATCG ATAATCTTGA ATATCAAAGG GGAAACAAGC GTGACTTAGC TTTATTACAA
AAGCTCAAAG CCGCTGGGAT TCCTGTGGTC TCTGTGTTTA TTAGCGGTCG ACCTTTGTGG
GTCAATCCTG AGCTCAATGC CTCTGACGCT TTTGTCGCCG CTTGGTTGCC TGGCACTGAA
GGAGCAGGGA TTAGTGAAGT GTTATTCACT CAAGCTAATG GTGATGTTCA GTATGACTTT
AATGGCAAAT TATCTTTCTC ATGGCCGTCG ACACCGCAGC AAACTCAAGT GAATGTTCAC
GACAGTGATT ATTCGCCATT ACTTCCCTAT GGCTATGGCC TGAGCTATGC GGATAAGGCA
AATAGTACTG CGCCTGCGAT ATTATCGAAT AGTTTGTCTG AAGATAATTT CAGTGAACAA
GTGCAACTCA GCCAGAAGCC GTTATTCGAG CGTGCCGTTA AGGCGCCTTG GAAAATGCTG
ATTGGCAGTG TTGAAGGTGA CAAGGTTTCG ATGGAACCTA TCGCCAGCAG CGTGCAGTCG
AATGATGTTG TCACGATTAA AACCTTTGAT AAACAAGTAC AAGAAGATGC ACGCCATGTC
AGCTTTAACG GTAAGGCGCT TGGTTTTGTG AGTTTGCAGG GGAACTTCCC TGAAGACTTA
CGGGCTTATC TGGCGAGCAA GTCAGTGTTG AGTATGCAGG TTAAAGTCGG TTCATCGATT
AAAGCGCCTG TTAATGTCGG CATGACCTGC GAAGGCGATT GTCGAGCCAA TGTGGATATC
AGCACTCAGC TAAGCGCGTT AAGCCTTGAT ACTTGGAGTG AACTAAACAT AGATCTCACT
TGCTATCAGG GGCAGGGGAT TGATTTTGGT AAAATTATCT CGCCTTTCAC ATTGTCATCA
TCGGGCGCTG TGGATATCAG TTTTAGCGAT ATTATCTTAA AGCCAAAGAC GGCCAGTATG
GCGTCAGTCG AGTGTCCGTA A
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| Protein sequence | MSVIALRPKT FSLSLLAVLT CASLSGCSKT EQIKAADSQS VKPSDVAASS SPNSPNGYSI
NGKSTDINIW PQLTIPHKNH EDVEKRVADL LAKMTLEQKV AQMIQPEIRD ITVEDMRKYG
FGSYLNGGGS YPNQDKHATP ADWIALADAM YQASMDDSLD GISIPTMWGT DAVHGHNNVI
GATLFPHNIG LGAAHHPELI QQIAAITAKE VMVTGIDWVF APTVAVVRDD RWGRTYEGYS
EDPVIVKSYS HAIVEGLQGG NDKDFLSDQH VIATVKHFLG DGGTEGGDDQ GDNIASEQAL
FDIHAQGYVG GLTAGAQTVM ASFNSWHGAK NHGNPYLLTD VLKARMGFDG FVVGDWNGHG
QVEGCSNESC PLAVNAGLDV FMVPTAAWKP LYENTIAQVK SGLISQARID DAVSRILRVK
IRAGLFEKPS PAKRPLSGKT ELIGQASHRD VARQAVRESL VLLKNNQHLL PLSPKAKVLV
AGDAADNIGK QSGGWSITWQ GTDNQNADFP GATSIYAGIA KAVSASGGSA VLSVDGQFDA
ANKPDVAIVV FGEEPYAEGN GDIDNLEYQR GNKRDLALLQ KLKAAGIPVV SVFISGRPLW
VNPELNASDA FVAAWLPGTE GAGISEVLFT QANGDVQYDF NGKLSFSWPS TPQQTQVNVH
DSDYSPLLPY GYGLSYADKA NSTAPAILSN SLSEDNFSEQ VQLSQKPLFE RAVKAPWKML
IGSVEGDKVS MEPIASSVQS NDVVTIKTFD KQVQEDARHV SFNGKALGFV SLQGNFPEDL
RAYLASKSVL SMQVKVGSSI KAPVNVGMTC EGDCRANVDI STQLSALSLD TWSELNIDLT
CYQGQGIDFG KIISPFTLSS SGAVDISFSD IILKPKTASM ASVECP
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