| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1177 |
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| Symbol | |
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| ID | 5370131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1405752 |
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| End bp | 1406771 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829376 |
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| Product | transcription factor jumonji domain-containing protein |
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| Protein accession | YP_001365392 |
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| Protein GI | 152999711 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTTG ATGTGATTAA ACCTAAAACT AATGTCGTCA AACACCTTGA AAACTGCCCA
ACCGAGGAGA TGCTCGCGCT GATTAAAGAT GCTGAGCAGC CTTTGGTATT TAAAGGACTT
TGCGCAAACT GGCCTTTAGT GAAAGCAGGG CTTGAATCCA GCGATAGCGC GATGAAGTAT
CTGGCCCAGT TTTACCAAGG CATGCCCGTC ACCGCCTATT ATTTAGCGCC AGAACATCGA
GGCCGCGTAT TTTATAACGA CACTTTAGAT GGGTTTAATT ATCAGGCGGG TAAGTTAGAT
TTGCGGCAGA TTTTCACGCA ACTCACAGCG CAGCAAGCCG CCAGTATTTA TATGGGCTCA
ACCGATATTA ATCAGTGCTT ACCCGGACTT GGCGACGACA ATAGTTTCAA TCTTGCACCT
TTGTCACCGC TCACCAATAT CTGGCTTGGC AATCAAACTC GTATCGCTGC CCATTTCGAC
TTTCCCCACA ACTTAGCCTG CAATGTCGTC GGTAGACGCA CTTTTACCCT GTTTCCGCCG
GAGCAAATCA GCAATCTGTA TATTGGCCCA ATGGAGTTTG CCCCAGGCGG CCAAGACATT
AGCTTAGTCG ATATAGATAA TCCCGATTTT GACCGCTTTC CTAAATTTGC GAAGGCGATG
GAAGCCGCGC AGGTCGCCGA ACTGGAACCC GGTGATGTGT TATTCATCCC CAGTATGTGG
TGGCACCATG TGCGCGGAAT GGATGACTTT AATGTTCTCA TTACCCATTG GTGGCGAGAT
ACGCCCGGTT ATCTTGGTCG CCCCAATAAT GCGCTACTGC ACGCGATGTT AAGTTTACGC
TCCTTACCCA AGGCCCAGCG TCAGGCGTGG AAAGCCCTGT TCGATCACTA TATTTTTGAC
CATGAAGATG GCGATCTAGA GCATATTCCT AGTGCAGCCC AAGGCATGCT GACCACCCCA
CTCGATGAAA TCAACGCCCG AAAATTGCGG GCAGATTTAA CCAATAAGCT CAAACGTTAG
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| Protein sequence | MSLDVIKPKT NVVKHLENCP TEEMLALIKD AEQPLVFKGL CANWPLVKAG LESSDSAMKY
LAQFYQGMPV TAYYLAPEHR GRVFYNDTLD GFNYQAGKLD LRQIFTQLTA QQAASIYMGS
TDINQCLPGL GDDNSFNLAP LSPLTNIWLG NQTRIAAHFD FPHNLACNVV GRRTFTLFPP
EQISNLYIGP MEFAPGGQDI SLVDIDNPDF DRFPKFAKAM EAAQVAELEP GDVLFIPSMW
WHHVRGMDDF NVLITHWWRD TPGYLGRPNN ALLHAMLSLR SLPKAQRQAW KALFDHYIFD
HEDGDLEHIP SAAQGMLTTP LDEINARKLR ADLTNKLKR
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