| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1138 |
|---|
| Symbol | |
|---|
| ID | 5371480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1353140 |
|---|
| End bp | 1354681 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640829337 |
|---|
| Product | tryptophan halogenase |
|---|
| Protein accession | YP_001365353 |
|---|
| Protein GI | 152999672 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.443296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCAA GTAAAGATAT AAAGAGTGTC GTCATTGTGG GTGGCGGAAC TGCAGGTTGG
ATTTCTGCCT GTCATTTAGC TAAAAAGTTG AATGCTAGAA CACCTAAAAT ACAAGTTATG
TTAGTTGAGT CCCCGAACAT TCCTACTATA GGCGTTGGTG AAGGGACAGT GCCTATGTTA
CGAGAAACAT TAAAGTATTT TGGTATTCGA GAAGATGATT TTATTCGTCG CTGTGATGTA
ACATTTAAAC AGAGTGTTAA ATTCATTGAT TGGAATGAAC CAAATTCAGG GGAGTACTAT
CACCATTTAT TTGATTATCC CTACTTCAAA GATTTCACTT CAACTTGGCT CAATAAATCT
CTTTCAGATA GAGGCCGCTA CGCTGATCTT GTGTCAGTTC AAGGTCATTT AATTGATGCG
GGATATGGTC CTAAAGCGAT GACACAGCCT CAATATCGAG GGGCTATGCA TTACGCGTAT
CATCTCGATG CAGCAAAGTT TACCAAGTTG TTGACCGAAT TTGGTGTTGA ACGGTTAGGC
GTTAAACATC TGCTTGCAGA AGTTATTGAT ACAAAAATAG ACGCTCAGGG AAATATCTTA
GAGTTACATA CTGATAACGC TGGTGTATTG ACTGCGGACT TGTATGTTGA TTGTACTGGA
TTTAGTGCTC AACTCATTGG CAGCGCATGT AACGTTCCCT TCGTTGATAA GAGTGACATT
TTGTTTGTTG ACTCAGCATT AGTTGTGCAG CTTCCTTATG AAGATAAATA TACGCCTATT
CCTTGTTTCA CTAAATCAAC AGCACAAGAG GCTGGCTGGA TATGGGATAT CGGTTTGTCT
GAACGTCGTG GTGTTGGTTA TGTGTATTCC AGTCAATATT CATCAATAGA GCAAGCTGAG
AGTGTATTAC GGGAATATCT TGGTAAAGCA GCTGAAGAAA TCTCGTTTCG ACACATACCG
ATGAAGGTGG GGTATAGAGA GAAATCGTGG CAAGGTAACT GTGTTGCGAT TGGTTTGTCG
AGTGGTTTTG TTGAACCTTT AGAAGCGACT GGTCTTCTTA TGTTTGATGC GACAGCCAGA
ATGTTAGCTG AATGTTTTCC TGCTAATACT GACGTTATGC CACTTGTGGC TAATCGTTAT
AATCAGCGAG TATCGAATGC TTGGAATCGG GTGATTGACT TTATTAAACT TCACTATGTC
ACAGCCAAAC GAATGGATAC GCCTTTTTGG GTTGATAATA AAAATGAAAT AAGTATTCCA
GACTCATTAA AAGAACATCT AGAATTGTGG CGCTATCACA TACCGACTGC CTATGACTTT
ACTTCTACGC TAGAATTTTT CAATTTAGAA AACTATTTAT ATGTACTCTA TGGCTCAGAC
TTTGAGTCAA AATTAAAGAT GACATTAAAT GATGAAGAGG AACGGCTTTT CTCGGAAATG
ACCGACAAAC TAGACAAGCA GGTTACATTA CTCAAATCGC AATTATTACC CCATAGGGAG
TTAATTGAAC GCATCAAGTT GTATGGCATC CAACTTAATT AA
|
|---|
| Protein sequence | MTSSKDIKSV VIVGGGTAGW ISACHLAKKL NARTPKIQVM LVESPNIPTI GVGEGTVPML
RETLKYFGIR EDDFIRRCDV TFKQSVKFID WNEPNSGEYY HHLFDYPYFK DFTSTWLNKS
LSDRGRYADL VSVQGHLIDA GYGPKAMTQP QYRGAMHYAY HLDAAKFTKL LTEFGVERLG
VKHLLAEVID TKIDAQGNIL ELHTDNAGVL TADLYVDCTG FSAQLIGSAC NVPFVDKSDI
LFVDSALVVQ LPYEDKYTPI PCFTKSTAQE AGWIWDIGLS ERRGVGYVYS SQYSSIEQAE
SVLREYLGKA AEEISFRHIP MKVGYREKSW QGNCVAIGLS SGFVEPLEAT GLLMFDATAR
MLAECFPANT DVMPLVANRY NQRVSNAWNR VIDFIKLHYV TAKRMDTPFW VDNKNEISIP
DSLKEHLELW RYHIPTAYDF TSTLEFFNLE NYLYVLYGSD FESKLKMTLN DEEERLFSEM
TDKLDKQVTL LKSQLLPHRE LIERIKLYGI QLN
|
|---|
| |