Gene Shew185_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1127 
Symbol 
ID5369786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1340209 
End bp1340670 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content43% 
IMG OID640829326 
Producttype IV pilus assembly protein PilX 
Protein accessionYP_001365342 
Protein GI152999661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC AAAAGGGAAT AGTATTATTT TTTGCTCTGA TTGTATTGTT ACTTATGACG 
ATCATCGGTG TTGCTTTAGC TGTTAATTCA ACCCAGTCCA TGCGTATGTC TGGAGCTGGC
TCAGAACGGA TAGAAGCTAA ATCTACTGCT GATGGCGGTT TAGAAGCTGC AATTGAGGCA
AATAAAGGCG CTAGCTTAGC CAAATTATCT GAGATTTCAT CTGTGGCTGA ATTTGGTTCT
AACCAAACAT TAACGCCAAT TCCTTACGAA GTTGATGGAG CCGGTAATGT CGTCATTAGT
GCTAAAGATG TCGGCTGTCA GCGAAGTGCA AGGGCGAATA GTGGTAATTT AATCAGTTGT
CGGCGGATTG AAATTAGTAG TACTGCCGCC TTTGGTCGGG ATGATTTAGG TCAGCTCACT
GTAGTCGCAG GTGTGGAACA AGAAGTTTTA ACTGGGAGTT AG
 
Protein sequence
MKKQKGIVLF FALIVLLLMT IIGVALAVNS TQSMRMSGAG SERIEAKSTA DGGLEAAIEA 
NKGASLAKLS EISSVAEFGS NQTLTPIPYE VDGAGNVVIS AKDVGCQRSA RANSGNLISC
RRIEISSTAA FGRDDLGQLT VVAGVEQEVL TGS