| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1051 |
|---|
| Symbol | |
|---|
| ID | 5370325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1248101 |
|---|
| End bp | 1248778 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640829244 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_001365266 |
|---|
| Protein GI | 152999585 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00300889 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA TGATCTTGGC CGCCGGACGA GGTGAGAGGT TACGGCCGTT AACGGATAAT
ATGCCTAAAC CTATGGTGCC AGTATTAGGT AAACCGTTGA TTGTTTACCA TATTGAAAAA
CTTGCCGCGT TAGGCATAGT CGATATCGTC ATTAATCATG CTTGGCTGGG GCATAAATTA
GTCGAGGCGC TGGGCGATGG CAGCGCTTTT GGGGTGCGAA TTCGCTATAG CGCCGAAGAG
AGTGCGCTTG AAACCGGCGG CGGTATTAAA CGGGCTTTGC CTTTATTGTG TGAGGGGGAA
AGCGATGAAC CCTTTTTGGT CATTAATGGT GATGTGTTTA TCGATGCCTT ACCGCCAATC
ACGCAGCTTG CTGCCGATAC GCTCGCCCAT CTCTGGCTAG TGCCTAATCC TGAGCAGCAT
CCGCAGGGGG ATTTCGCCTT GGATGGCAAT CGAGTGCAGG AGCTTGGTGA GACTAAGTAC
ACTTTTTCGG GCATGGGCAT TTATCGGCCG TCGCTTTTTA ATCACACGCC GCAGGGCGCG
TTTGCACTCG GTCCGCTGCT TAGAAAGCAA ATGGCCCAAG GCCGAGTCAG CGGCGCGCTG
TTTCACAGGC TTTGGTGCGA TGTTGGCACG ATTGAACGCC TGCAAGGGCT CGAACTGAGA
TTACAAAGCA ATACCTAA
|
|---|
| Protein sequence | MKAMILAAGR GERLRPLTDN MPKPMVPVLG KPLIVYHIEK LAALGIVDIV INHAWLGHKL
VEALGDGSAF GVRIRYSAEE SALETGGGIK RALPLLCEGE SDEPFLVING DVFIDALPPI
TQLAADTLAH LWLVPNPEQH PQGDFALDGN RVQELGETKY TFSGMGIYRP SLFNHTPQGA
FALGPLLRKQ MAQGRVSGAL FHRLWCDVGT IERLQGLELR LQSNT
|
|---|
| |