Gene Shew185_1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1031 
Symbol 
ID5373259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1229327 
End bp1229941 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content49% 
IMG OID640829224 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001365246 
Protein GI152999565 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0778058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTA GTACTTGGTT AGGTTTATTG GCTATTTGTT GTTTGGGAGC TATGTCGCCG 
GGCCCAAGTT TAGCTATGGT GGTGCGCCAT ACCTTAGGCG GTGGACGGGG CAAGGGTATA 
GTTTGCGCGT GGGCACATTC GATAGGCATT GGGATTTATG CGTTGGTGAC GTTACTCGGC 
TTAGCCGTCG TACTTAAAAA GGCGCCCTTA GTCTTTAATG GCATTGCGAT TCTCGGTGCT 
TTGTATCTGG CTTGGATGGG AGTTCAGGCG CTGCGTTCCA AGGGCGGTAT GCAAGCTAAA 
TTGGCCGCCG GGGAGGCGAC AGATACCTTG ACCGCAGCCC GTGATGGTAT CGCCATTTCC 
TTATTCAATC CTAAAATCAT GCTATTTTTC CTCGCATTAT TCAGCCAATT CGTGATGGTG 
GCCGACAGCA TGACAGCCAA AGCCTTAATC GTTTTTACCC CATTAGTGGT CGATGGTCTT 
TGGTATACGC TTATTGCTTT GTTGTTGTCC CACTCAAGCG TGTTGCCTAA GTTACGGGAA 
AAGGCTGGGT TAATTGATAA GTTGTCTGGC GTGGTATTGA TACTGCTAGC GATCCGCGTG 
GTATATACGC TTTAA
 
Protein sequence
MSFSTWLGLL AICCLGAMSP GPSLAMVVRH TLGGGRGKGI VCAWAHSIGI GIYALVTLLG 
LAVVLKKAPL VFNGIAILGA LYLAWMGVQA LRSKGGMQAK LAAGEATDTL TAARDGIAIS 
LFNPKIMLFF LALFSQFVMV ADSMTAKALI VFTPLVVDGL WYTLIALLLS HSSVLPKLRE 
KAGLIDKLSG VVLILLAIRV VYTL