| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0930 |
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| Symbol | |
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| ID | 5372909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1106773 |
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| End bp | 1108497 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829125 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001365147 |
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| Protein GI | 152999466 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGACT TGTGGCTGTT AGCGATTATT TTGTTAGGTC TTGTGGCTGG CTTAATTAGC
GGCCGTATCA ATCCTGCGGT ATTGTTTTTA TTTGCATTTT TGCTCTGTTA TTTGCTTGGC
ATGGTTGCGC TCGATACCGC ATTAACAAGC TTTACAAATA TTGGCTTAGT CACACTCGTC
CTGTTGGTGT TGGCCGCTAC GGCGTTAGAA AAAACCTCCC TGCTGGGTAA GTTGAGTCAA
GTCATAGGCA ATAGTTCTTT GCCTATGACA ATGGCAAAGC TTGGGCTATC GACCGCCTTG
CTGTCGTCCT TTACCAATAA CACTGCGGTG GTGGCGTCGC TTATCGGGGT TGTGCGTCGC
AATCAAGCAC ACGCACCCGC TAAGTTATTA TTGCCGTTAA ATTATGCGGC AATTTTAGGT
GGTACACTGA CCCTGATTGG CACCTCGACC AACTTGATTG TGAACTCCTT TGTGGAAAAC
GCCGGCTTAC CCGCCTTAGG TTTCTTCGAG TTCACGCCGG TCGCTGTTGT GATCGTCGTC
GCTGGCATCT TGTTATTGAT CTTACTAGCG AACATTCTGC CCGACAGACG GGAAGAGTCG
GGTGAAGAGG CACTGCCTTA TTTGCTTGAA GCCCATGTGG CAAAAGGCTC GTCCTTAGTG
GGTCGCAGTG TGGTGGATAA CAAACTCAGG GCGCTGAAGA AGTTATATCT GGTTGAACTA
GAACGCAGCG GCATTTGTAT TTGCCCTGTT CCGCCCCAGT TAGTGCTGCA AGCGGACGAT
GTGCTGCGCT TCAGTGGTGC GGTGGAATCG GTTGAGTTAT TACATCAATT CGATGGTTTA
GATTGGTTTG GTAAGCATCA AGCCAAGGGA CAAAATTTAG TTGAAGCTGT GCTCGCGCCA
TCATCCCGTT TAGTCGGCAG TTCGTTGAAA GAGTCACGTT TTCGTGAACA GTTCGATGCG
GCCGTGATGG CGATCCGCCG CGGAAATCAT CCGCTGAAGG GCGGGCTTGG CGACATTATT
CTGCAACCCG GCGATGTATT GTTATTGACG CCCGGCGATG GTTTCAGCAA TAGCGCAAAA
TTAAGTTCAG AATTTGCGGC GATCAGCGGC TTAGATTTGA ATGTGCGCTT AGACAGTCGC
CGTGGTCGTT GGGTATTGCT CGGCTTTGCG GTCACGATCG TTTTGAGTGT CACCGGTGTA
TTGCCATTGG CTAAAGGTTT AGTGCTCCTG CTGCTGAGTT ATTTTGTTAT TGGCGCTGTT
ACTTTGGCAG AGCTTAAACG CCGTTTTCCA TTGGAATTAG TGGTGATAGT GGGGAGTGCG
TTAGGGCTCG CTAACTTGAT GATGAGCACT GGCCTTGCGG ACAGTTTAGC CCAAGGATTG
CTCTCGGTTA TCAATGGTTA TGGGGTGTTT GGCGCTTTTG TCGGTGTGTA TTTTATGACC
TTGTTGTTGA CTGAATTAGT TACCAATAAT GCTGCCGCAG CGCTAGCTTT CCCCATCGCC
TACGCGATTG CGCTTAATTA CGGTGTCGAT GCAAGACCCT TTATTATGGC CGTGGTCTTT
GGTGCCAGCG CGAGCTTTAT TTCACCCTAC GGCTATCAAA CCAATTTGAT GGTATTTAAC
GCGGGTAATT ATCGCTTCAG TGACTTCGTC CGCCTAGGAT TGCCGTTATC TGTGCTGTAT
TCCCTGATAG TGATATTTAT GGTGCCGATC ATCTTTCCAT TTTAG
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| Protein sequence | MSDLWLLAII LLGLVAGLIS GRINPAVLFL FAFLLCYLLG MVALDTALTS FTNIGLVTLV
LLVLAATALE KTSLLGKLSQ VIGNSSLPMT MAKLGLSTAL LSSFTNNTAV VASLIGVVRR
NQAHAPAKLL LPLNYAAILG GTLTLIGTST NLIVNSFVEN AGLPALGFFE FTPVAVVIVV
AGILLLILLA NILPDRREES GEEALPYLLE AHVAKGSSLV GRSVVDNKLR ALKKLYLVEL
ERSGICICPV PPQLVLQADD VLRFSGAVES VELLHQFDGL DWFGKHQAKG QNLVEAVLAP
SSRLVGSSLK ESRFREQFDA AVMAIRRGNH PLKGGLGDII LQPGDVLLLT PGDGFSNSAK
LSSEFAAISG LDLNVRLDSR RGRWVLLGFA VTIVLSVTGV LPLAKGLVLL LLSYFVIGAV
TLAELKRRFP LELVVIVGSA LGLANLMMST GLADSLAQGL LSVINGYGVF GAFVGVYFMT
LLLTELVTNN AAAALAFPIA YAIALNYGVD ARPFIMAVVF GASASFISPY GYQTNLMVFN
AGNYRFSDFV RLGLPLSVLY SLIVIFMVPI IFPF
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