Gene Shew185_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0925 
Symbol 
ID5372559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1100302 
End bp1101864 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content46% 
IMG OID640829120 
Producthypothetical protein 
Protein accessionYP_001365142 
Protein GI152999461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTA GCTACCGCAG CATAGTCATG CTACTCAGTG TCATTATTTT CGCGAGCTTA 
CTTAAGCTCG CGTTTTTTGC TGTGCCAAAA GATAACACTG CACCTATGCT TAATGCGCAA
GAGGTACGCC AAGATCTCTA TGCCTTATTG GATCAAATCG AGCAACACTC GGCGTTTTAT
GCGTTAACGC CCGATAAAGC CAGTCCGCAA CTCAAGTATA TGGCGAGCCT GATTGTCGAG
CAGTATCAAG ATATGACTCC CAATGACCGC TTTGCCGCTG AAATCACTAA GCTACTCAAT
AGCCTCAAAG ATCCCGGTGC TCAAGTGCAT GACTTCGATG ATCAAAGCGG CGATCTCCCG
TTAACCTTAC GGCCACTCAA CGACCAGTGG TTAGCCTTAG ATAGCAGTAA TAGTCCAATC
AACAACGACT TCCCCTTTGT GACTCATATC GACGGTTTGC CTATGAGTAA ATGGGTGGCG
GCCAGCCAAG CCTATTTACC TGAGCCTGCA AAACAGAGCC AAGAAATGCA GTTACCTTGG
CTGAAAAAAC TGAACCTGCT GCGTGAAGAT TTAGGCCTCA GCATCAAGCC CTATGTGCTC
ATTACGCTGA TTAATGATGA TCTGCAAACC CAGCAGGTGA CCCTCGCCCT GCCAAGCCAC
GAACCGCAGG CGCAGGCGCA ATTAGCGGCA AGTAATCAAG AAGATAAGAC ACAAGATATG
AGTGTTTTTG AGTTCATTAC TCAGTTGTCT CAATTTGAGC GCTCCGAATT CCAAGACGTT
CCACATCAAT TAGAGACGGT TAATAATACT ACGGTCAAAC TGAAGATCAG CGATCTGTAC
GCCTTTGAAT TGGATAGAGA TCTACAGCAA GAACTGCTCA AGGGTATGAC GCATCCCCTA
CTGATCATCG ACTTACGTGA TGCTAGTGGT TTTAGCCCAA AGTTATTGAC CCTATTATCG
CGATATCAAG ATGCTGATTT AAATAACACT TTAGCGCCGA ACGTGATGGG ATTTGCACAC
TATCGCCGCT CACCAGAACT GAGAAATGAC TATCTACAGC CACTCAACTT TAAGCCTTTA
GCTGCGCTCG AATACAGTGT GCCTCGACTA AAATCCCTCA CACGCAACTT ACCCTCAGTC
GATGAAGATA AATTCAGCCC TTGGTATATT CGCACTAAAC CTGCGGTGAC TCCTGAAGGG
CGAAATCGCT TAGCGCTGCT CGTGAGCCCC AAATGCCGCC AAGAATGTGA GTGGATTGCC
TATCGCACTA AATCTTGGTC TAGGGCGAAT TTGATTGGTG AAAAAACCTC GGGCGACTTT
GCTCGACAGT ACCATTTTAA GCTGCCAAAC AGTGGATTAG ACATAAGATT CAGTAGTTCG
TTAACCTATG ATGCCCAGGG AAAACTCTTG TCAGGTGCTG GGACTGAGCC CGATATTTGG
CTTCCCCAAA ACAGTGATAT TCAATGGCAA GGATTAGTGA GTTTAGTGCG TTCCGCTAAG
CCAAAAACTC AGCTCATTCA AACATCACAA CCCACTAAGT TGGCTCAAGC TAAGCTGAAT
TAA
 
Protein sequence
MSFSYRSIVM LLSVIIFASL LKLAFFAVPK DNTAPMLNAQ EVRQDLYALL DQIEQHSAFY 
ALTPDKASPQ LKYMASLIVE QYQDMTPNDR FAAEITKLLN SLKDPGAQVH DFDDQSGDLP
LTLRPLNDQW LALDSSNSPI NNDFPFVTHI DGLPMSKWVA ASQAYLPEPA KQSQEMQLPW
LKKLNLLRED LGLSIKPYVL ITLINDDLQT QQVTLALPSH EPQAQAQLAA SNQEDKTQDM
SVFEFITQLS QFERSEFQDV PHQLETVNNT TVKLKISDLY AFELDRDLQQ ELLKGMTHPL
LIIDLRDASG FSPKLLTLLS RYQDADLNNT LAPNVMGFAH YRRSPELRND YLQPLNFKPL
AALEYSVPRL KSLTRNLPSV DEDKFSPWYI RTKPAVTPEG RNRLALLVSP KCRQECEWIA
YRTKSWSRAN LIGEKTSGDF ARQYHFKLPN SGLDIRFSSS LTYDAQGKLL SGAGTEPDIW
LPQNSDIQWQ GLVSLVRSAK PKTQLIQTSQ PTKLAQAKLN