Gene Shew185_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0922 
SymbolmtgA 
ID5372495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1096617 
End bp1097402 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content48% 
IMG OID640829117 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_001365139 
Protein GI152999458 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCCC CTTTATATGC GATGCGAGAT CATGTTAGGC GTCCTAGTGC CAATAAGTCG 
AGTAGTCCTG CTCCTCAGAG GCGTAAGCGT GGCTTTCGTC GTTTATTGTC TTGGCTATTC
AAGGGATTAG TATGGGCATT AATTTGCTCA ATCTTATTGG TTATTCTACT CAGATTCGTT
AATCCACCCA TGTGGACCTG GCGGATTGAG CGCGCCTTAT TTCCACCCGC ACCTATGGGG
GAAGTCATGC ATCAGTGGCG CGATTTAGCG CACATTTCTC CTGAGCTACA ATTGGCGGTG
ATCGCCGCAG AAGATCAACG TTTTGCCGAG CATACGGGAT TCGATTTAGC CGCGATAAGT
TCGGCGCTGA AATACAATCA GAAAGGCACT AAAGTTCGCG GAGCCAGTAC CTTAAGTCAG
CAGGCGGCGA AAAACCTGTT TATGTGGTCT AGCCGCAGTT TCTTTCGTAA GGGATTAGAA
GCTTGGTTTA CCTTAATGAT GGAACTGACT TGGGATAAGT CGCGCATCCT TGAAGTGTAT
TTAAATATCG TCGAATTTGG CCCAGGTATT TACGGCGCCG AAGCGGCATC AAAGCATTAT
TTTGGAAAGT CTGCGGCAAA ACTAACCCAA TATGAGGCTT CATTACTCGC AGCCATCTTA
CCTAATCCTT GGCGTTATAA AGTGTCACCT CCGTCGTCCT ATGTGCAGCA GCGTTCCGCG
TGGATCCGCA AACAAATGCG CCAGTTAGGT GACGTCACGC TTAAAAAAGT CCACGAAGCG
GGATGA
 
Protein sequence
MTAPLYAMRD HVRRPSANKS SSPAPQRRKR GFRRLLSWLF KGLVWALICS ILLVILLRFV 
NPPMWTWRIE RALFPPAPMG EVMHQWRDLA HISPELQLAV IAAEDQRFAE HTGFDLAAIS
SALKYNQKGT KVRGASTLSQ QAAKNLFMWS SRSFFRKGLE AWFTLMMELT WDKSRILEVY
LNIVEFGPGI YGAEAASKHY FGKSAAKLTQ YEASLLAAIL PNPWRYKVSP PSSYVQQRSA
WIRKQMRQLG DVTLKKVHEA G