Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0888 |
Symbol | |
ID | 5370544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1051227 |
End bp | 1051916 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640829083 |
Product | phage shock protein A, PspA |
Protein accession | YP_001365105 |
Protein GI | 152999424 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0755885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCATTC TGAATAAAAT TTTAACAGCG TTTCGTGGTG GTGCTACCGA AGTGGGTCAA GGCATCGTTG ACGCAAACTC AACCCGTATT TTCGAACAGG AAATCCGTGA CGCAGAAAAG CATTTAACCA ATGCTAAACG TGAACTGACC GATGTCATGG CGAAAGAAAT GCAAGCCAGC CGTGAAATCG ACCGCCTGAA ACGTTCGATT GCCGAACACG AAGGTTATGC GACTCAAGCA TTGGACAAAG GTAATGAAGC CTTAGCAATT GAAATTGCAG AGAAGATTGC CGAGTTAGAC CAAGAGCTGT CTGAGCAACA AAGCGCCAAC GATAACTTTA GCGCCCATGC TGCACGTTTG AAAGACTTAG TGAAGAAAAC CGAGCGCCAA CTGTCTGATT ATCAACGTCA GCTGAGCATG GTTAAAACCA CTGAAAGCGT GCAAAAAGCC ACGGCTACCA TTACTGACTC GTTTGCGTCT AGCAACTCTA AGCTGCTGAA CGCTAAAGAT TCACTCGAGC GCATCAAGGC TCGTCAGCAA CAGTTTGACG ACCGCCTGAA AGCGGCAGAA ACCTTAGCCG ATGAAAACAG TGACAAGTCA CTGCAATCTA AGCTAGCCGA AGCCGGTATT GGTGAGCAGA AGTCGAATGC AAATGCTGTG CTAGACCGAA TCAAAGCACG TAAAAGCTAA
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Protein sequence | MGILNKILTA FRGGATEVGQ GIVDANSTRI FEQEIRDAEK HLTNAKRELT DVMAKEMQAS REIDRLKRSI AEHEGYATQA LDKGNEALAI EIAEKIAELD QELSEQQSAN DNFSAHAARL KDLVKKTERQ LSDYQRQLSM VKTTESVQKA TATITDSFAS SNSKLLNAKD SLERIKARQQ QFDDRLKAAE TLADENSDKS LQSKLAEAGI GEQKSNANAV LDRIKARKS
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