| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0874 |
|---|
| Symbol | |
|---|
| ID | 5369341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1034997 |
|---|
| End bp | 1036748 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640829069 |
|---|
| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
|---|
| Protein accession | YP_001365091 |
|---|
| Protein GI | 152999410 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGC TAATCCCCTT TATTCGATTG TTCTCGCGCC AGTGGCTGAT GATGTCCGTG
GGCTTGCTGC TGACCATTAT TACTTTAATG GCTGGCATAG GTTTACTGTC ACTTTCGGGC
TGGTTTCTTT CCGCTACCGC GGTCGCGGGT TTGACGATAG TTACGGCGCA GTCCTTTAAC
TTTTTCACTC CTGCGGGCGG CGTGCGTTTC TTATCAATTG CCCGTACTGC CAGTCGTTAT
GGCGAGCGTT TAGCGACCCA TGAGGCAACC TTTAAGTTGC TGACTGAGCT TCGCGTTTGG
GCGTGGCGTA AACTCTTGCC GCTCAGTGCT AAAAATCTGC AGGGGCTACG CCGTGGCGAC
ATGCTTAATC GCTTAGTTGC CGATATCGAT ACCCTAGATC ATCTATATCT GCGATTGCTC
ACGCCTATGG CGGCATCACT GCTGATGACT GGGCTCTTGT ATCTATTCCT CGCTTGGTTC
GATGCCAAAC TTGCCCTCAG TCTTTGCCTA TTTTTAGTCG CCGTTTGGCT GGTGATGCCA
CTGCTATTTT ATCGCCTTGG ACACGCGCCG AGCCGGACTA TGCTCGAAAC CAAGCGTCAT
TATCGGGTGC AATTATTGGA TATGTTGCAA GGCCAAGCCG AACTCTGCCT ATTTGGCGCC
AACGACAGAT TCAGGCAGAA ACTGAATGAT GCTGAGGTCG CACTTTTTCG CAGCCAAAGT
GCGATGGCCA ATATCACAGC GCTCAGCCAA GCCATGTTGA TCCTCTCTAC TGGCTCAGCC
TTGATTATAA TGCTGTATTT AGCCGCTCAA GGCGTGGGTG ATGCCGTGCC GCCGGGCCCT
ATGTTTGCGC TTATGGTGTT TGCCACTATG GCCTGCGTTG AGATGATGAT GCCGATTGCG
GGCGCGTTTC AGCATTTGTC TGGCTGCGTA TTGGCGGCGA CACGGATTAA TGAAATCACT
GAACAAGAGG CCGATATTCA ATTTGTTGCC GATACTGGCC TGAGGGCAAA ATCTGGCGCA
TTGCAGATTG AAGATATCCA CTTTGGTTAT CGAGACGAGC AACACGTGCT GCAAGGTTTG
TCCCTTGAGA TAAAAGCGGG GCAAAAAGTC GCGTTACTTG GGCCAACGGG TTGCGGTAAG
TCGAGTTTAC TGGCGCTGAT TACCCGCGAA TGGCAAGCGC AGCAAGGGCA CATCAAGCTC
GATGGTCTTC CTCTTTCAGA TTACTGCGAG CGCGGCCTTA GGGATGCGAT AACTGTGATT
AGCCAACGCA TCTATCTGTT TGCGGGCACC TTGCGGGAAA ATTTAGTATT AGCGCTACCT
GTTATCGAAG GCGAGAAACG CACGGCCCAC GACGCACGCT TGATTGATGT GTTACAGCGG
GTCGGACTTG GCGCTTTACT CTCAGGTGAT AAACCGCTGG ATATGTGGAT AGGTGAAGGT
GGACGTCAGC TTTCGGGCGG CGAGCAGCGC CGAATTGGTG TTGCAAGAGC GCTGCTGCGT
GATGCGCCGC TGCTATTGCT CGATGAACCG ACTGAAGGGC TAGATAAACG TACCGAGCGG
GAGATTTTAA GTTTACTTTT TGAGTTTGCT CAGGATAAAA CCTTGCTGAT GATTAGCCAT
CGTTTAACTG CTATGGCGAA GATGGATCAC ATTCATCTAC TCGGTCAGGG TAAGATTATT
GCGTCTGGCA CTCACCAGAG CTTAATTGAA GACAGTGCAG AGTATCAGGC CTTGTACCAA
AGACTCGCTT AA
|
|---|
| Protein sequence | MKVLIPFIRL FSRQWLMMSV GLLLTIITLM AGIGLLSLSG WFLSATAVAG LTIVTAQSFN
FFTPAGGVRF LSIARTASRY GERLATHEAT FKLLTELRVW AWRKLLPLSA KNLQGLRRGD
MLNRLVADID TLDHLYLRLL TPMAASLLMT GLLYLFLAWF DAKLALSLCL FLVAVWLVMP
LLFYRLGHAP SRTMLETKRH YRVQLLDMLQ GQAELCLFGA NDRFRQKLND AEVALFRSQS
AMANITALSQ AMLILSTGSA LIIMLYLAAQ GVGDAVPPGP MFALMVFATM ACVEMMMPIA
GAFQHLSGCV LAATRINEIT EQEADIQFVA DTGLRAKSGA LQIEDIHFGY RDEQHVLQGL
SLEIKAGQKV ALLGPTGCGK SSLLALITRE WQAQQGHIKL DGLPLSDYCE RGLRDAITVI
SQRIYLFAGT LRENLVLALP VIEGEKRTAH DARLIDVLQR VGLGALLSGD KPLDMWIGEG
GRQLSGGEQR RIGVARALLR DAPLLLLDEP TEGLDKRTER EILSLLFEFA QDKTLLMISH
RLTAMAKMDH IHLLGQGKII ASGTHQSLIE DSAEYQALYQ RLA
|
|---|
| |