Gene Shew185_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0858 
Symbol 
ID5373662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp1016108 
End bp1016773 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content50% 
IMG OID640829053 
Productanti-ECFsigma factor, ChrR 
Protein accessionYP_001365075 
Protein GI152999394 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAATA TGAACTTTAG CGAACGTGTC GTTATTGATA CGCAGCAGCA ACCCTGGTTG 
CCAAGTCCTG CTCAAGGCGT TTGGCGCAAA CCACTCGAAC GGGAGGCTAA AGAGTCAGGA 
CACACCAGCA GCATAGTGAA ATATGACGCG GGCTCGCAGT TTGCGACCCA CCCGCATCCG 
CTGGGCGAGG AAATCTTTGT GCTCGAGGGG GTATTTTCCG ATGAAAACGG CGATTACCCC 
GCGGGCAGTT ATCTTCGCCA TCCGCCAGGG AGCCAACACG CGCCGTTTAG CCAAGAAGGC 
TGCGTTATCT TAGTTAAACT CAATCAATTC AATCCGCGAG ATCTTGATGT GGTCAAGATT 
AACACTCAGC AGACTCCTTG GTTACAAGGC ATAGGCGGCT TACAAGTGAT GCCGCTACAT 
GAATTCGAGC ATGAACATAC TGCATTAGTG AAATGGCCTA AGGGTGAAAC CTTTCAACCC 
CATCGGCATT TTGGCGGCGA AGAAATATTG GTGTTAACCG GCAAGTTTCA AGATGAGCAA 
GGGGAATATC CGCGCCACAC TTGGATACGC AGTCCGCACA TGAGCGGTCA TTTTCCTTTT 
GTCGAAGAGG AAACCATTAT CTTAGTGAAA ACAGGACATT TACCCATTAG CACGATTCAG 
CCCTAA
 
Protein sequence
MLNMNFSERV VIDTQQQPWL PSPAQGVWRK PLEREAKESG HTSSIVKYDA GSQFATHPHP 
LGEEIFVLEG VFSDENGDYP AGSYLRHPPG SQHAPFSQEG CVILVKLNQF NPRDLDVVKI 
NTQQTPWLQG IGGLQVMPLH EFEHEHTALV KWPKGETFQP HRHFGGEEIL VLTGKFQDEQ 
GEYPRHTWIR SPHMSGHFPF VEEETIILVK TGHLPISTIQ P