| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0790 |
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| Symbol | |
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| ID | 5371735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 924516 |
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| End bp | 925580 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640828984 |
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| Product | porin |
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| Protein accession | YP_001365010 |
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| Protein GI | 152999329 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000041631 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CTCTGCTGAC TACGGCTATT ATTTCTAGCC TCACACTCTA TTCATTCACA
GCACTCGCCG ATGGCCCTGA ATTCTATGGT CATGCTGATC TTGCTATTAC CAACTCAGAC
ACAGGTTACG CAACTCAGAA CCAAAAGGAC GGCACTGTCC TTGAAAACAA CTTCTCATGG
TTAGGCGTAA AAGGTTCTGA AGCTGTAAGC CCCTATTTTG ACATCATTTA TCAAATGGAA
TTTGGCGTCG AAAACTTTGA TAACTCAAAC AAGACGTTCA ACGCCCGTAA TACTTTCCTT
GGTATCAGAA GTGCGGCTGG TACTGCCTTA GTGGGCCGTA ACGACACAGT ATTTAAAGCA
GCAGAAGGTA GCTTCGATCT CTTTGGCAAC ACCAACGCCG ATATCGACTT GCTGGTTGCA
GGCCAAACTC GCTCCGCCGA TGGCATTTCT TACTATTCAC CTAAAATTGC CGATCTGGTG
ACGCTTAATG CCACCTATCT GATGAGCGAT AACTATGATC AAGTGGATAG CAATGGCGAC
GAGGTGTACA GCAAAGATCA CATGTATGCT CTGAGCGCCA CCTTAGGGGA TAAAGCCTTT
AAAGCACAAA ACTACTATGT CGCTGCCGCC TATAGTGATG GTATTGATAA CGTTGAAGCC
TACCGTGGTG TGGCCCAAGC TAAATTCGGT GATGTTATCT TAGGTGCCTT ATATCAACAC
AGTGAACATG TGGATGATAA GTTTGCCAAT CTCTCAGGTG ATACCTACTT CGTCAACGCG
GCTTACTTAA TTGGCGACTT GAAATTGAAG ATGATGTACG GCAAAGATAA CTCAGGTTTA
GGTAAATACG TGAGCCGTTA TGTCGGTGAC CAAGACAACA GCGGTTTGGA ACAGGTTCGC
GATGTCGACC TGCAACAGTT CAGTGTGGGT GCGGATTACC GTCTGAGCAC TAAGACTATG
GTCTATGGTC ACTACACGCG CTTCGATGGT GATCTTATGT TGGCCGATAT GAAGCAAGAC
CTTAATGACA ACATCTTTAC TGTTGGTTTA CGCGTTGATT TTTAA
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| Protein sequence | MKKTLLTTAI ISSLTLYSFT ALADGPEFYG HADLAITNSD TGYATQNQKD GTVLENNFSW
LGVKGSEAVS PYFDIIYQME FGVENFDNSN KTFNARNTFL GIRSAAGTAL VGRNDTVFKA
AEGSFDLFGN TNADIDLLVA GQTRSADGIS YYSPKIADLV TLNATYLMSD NYDQVDSNGD
EVYSKDHMYA LSATLGDKAF KAQNYYVAAA YSDGIDNVEA YRGVAQAKFG DVILGALYQH
SEHVDDKFAN LSGDTYFVNA AYLIGDLKLK MMYGKDNSGL GKYVSRYVGD QDNSGLEQVR
DVDLQQFSVG ADYRLSTKTM VYGHYTRFDG DLMLADMKQD LNDNIFTVGL RVDF
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