| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0755 |
|---|
| Symbol | |
|---|
| ID | 5373529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 888340 |
|---|
| End bp | 889914 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640828949 |
|---|
| Product | lambda family phage portal protein |
|---|
| Protein accession | YP_001364975 |
|---|
| Protein GI | 152999294 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5511] Bacteriophage capsid protein |
|---|
| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTA TCAATGATGC GCTGGCGATA TTTGCCCCGC GTTTAGCATT ACAGCGTGAA
GCGGCCGCAA TGAGCTACCG CAACCTGAAA GGGTATGAAG CCGCCAGCCC AAGCCGCACG
CATCGCGCTA AAAAGGAAAG TCGCGGCGCC AACCAAGCGG TATTTGCGGC AGGTAAAAGC
CTGCGTGAGC AAGCGCGCTG GTTAGATGAA AATCATGATC TCAGCATTGG CATTCTCGAC
CGCATGGAAG AACGGGTGAT CGGTGCCCAA GGGATTGTGG TCGAACCGCA GCCGCGCAGT
ATTAGCGGTG AAATCCTTGA TGACTTAGCC AACGATATTC AACGCCGTTT CGGTGCATGG
TCGCTTAAGT GTGACGTTAC TGGCCGCTTT AGTCGCCCTG AATTAGAGCG CTTGGTGTTA
CGTAGCGCCC TGCGTGATGG TGATGTGTTT GGCCAGCATG TTATAGGTAA AGTGGCTAAG
TTCGGCCACC CAAATGAGCA AGGCACTCAA TATAGCATTG AAGCCTTAGA AGCCGACTTT
ATCCCCTATG AGTTAAACGA ACCAGCAAAG CGGGTACGCC AAGGGCTTGA GGTTAACGGC
TGGGGTCAAG TGGTTAACTA TCACGTATTG CTCGATCACC CTGCTGATCA AGTTGGCTTT
CGCTACAAAA CCAAAGTGAT ACCCGCATCG AGCATGATGC ACTTAGGCTT GTTCAAACGC
TTGCACCAGC TGCGCGGCGC TTCGTTATTC CACGGCATTT TAACCCGCCT CGGCGATATT
AAAGACTATG AGGAATCTGA GCGAGTAGCG GCAAGGATTG CGGCCGCGCT GGCGTTCTAC
ATTAAGCGCG GCGATGCCGC CATGTTTGTT CCTGACTCAA GTGGTGAATC GTCAAGCCGC
GAAATCCCCA TTGCACCTGG CATGACCTTC GATGATCTGA AGCCCGGTGA AGATGTGGGC
ATGATTGAAT CCAATCGGCC TAATGTGCAC TTAGTTGATT TTCGTAACGG CCAATTAAAA
GCCGCCGCAG CCGGTACCCG TGGCAGCTAT TCCAGCATTG CCCGTGACTA CAACGGCAGT
TATTCAAGCC AGCGCCAAGA GCTAGTTGAG CAAGACGAAT CCAACCGAAT TATGCAGCAG
TGGTTTTGTG CTGGCTGGTC GCGGCCTGTG TTCCGCAATT TTCTCAAAAT GGAAATGCAC
AACAAGCAGG ACCCATTAGT GCTACCGCCT GATCTCGACA TGCGCACCTT ATTTGATGCC
GTGTACTACG GGCCCACCAT GCCATGGATT GACCCACGCA AAGAGGCCGA AGGCTGGGAA
ATGATGATCG CTGCCAACGT CGCAACCGAA GCCGATTGGA CTCGCGCCCG TGGCCGTAAT
CCTGCAGAAG TAAAACGCCA GCGTAAGCGT GAGGTGGATT ACAACCGCGA AAACAACATG
GTCACGGCCA ATGACCCCGA CCCCTCGCTA GGAGATCCTA ACAGTGAAAA AGACCCCAAT
AGCATCAGTA ATGCTAAGCG CAATGCTGCC AAGCGGAGCA CTGAGCGTGC CCGTCGCAAC
GCTGAACCAG AGTAA
|
|---|
| Protein sequence | MSIINDALAI FAPRLALQRE AAAMSYRNLK GYEAASPSRT HRAKKESRGA NQAVFAAGKS
LREQARWLDE NHDLSIGILD RMEERVIGAQ GIVVEPQPRS ISGEILDDLA NDIQRRFGAW
SLKCDVTGRF SRPELERLVL RSALRDGDVF GQHVIGKVAK FGHPNEQGTQ YSIEALEADF
IPYELNEPAK RVRQGLEVNG WGQVVNYHVL LDHPADQVGF RYKTKVIPAS SMMHLGLFKR
LHQLRGASLF HGILTRLGDI KDYEESERVA ARIAAALAFY IKRGDAAMFV PDSSGESSSR
EIPIAPGMTF DDLKPGEDVG MIESNRPNVH LVDFRNGQLK AAAAGTRGSY SSIARDYNGS
YSSQRQELVE QDESNRIMQQ WFCAGWSRPV FRNFLKMEMH NKQDPLVLPP DLDMRTLFDA
VYYGPTMPWI DPRKEAEGWE MMIAANVATE ADWTRARGRN PAEVKRQRKR EVDYNRENNM
VTANDPDPSL GDPNSEKDPN SISNAKRNAA KRSTERARRN AEPE
|
|---|
| |