| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0672 |
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| Symbol | |
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| ID | 5369321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 817105 |
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| End bp | 819045 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640828867 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_001364893 |
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| Protein GI | 152999212 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATACA ATCTCGCCAT TAATCAGTCT CAAAAAGATC GTTTATTCGC CGACATTGCT
ATCGACACAG ACAAAATCGT GGTTCCCCAA GTCATGGTTG ATAACTGGCA ACAAACCTTA
GATTTGCTCT CTGAATTGGT CGACACTCCC GCGGCTTTAA TCATGCGTGT CCATCAAACC
GATATAGAAG TGTTTACCTC GAGCCGCACT CAGGGGAATC CCTATAAAAA ACACGACAAA
GACAGTTTAG GCCACGGACT TTACTGCGAG ACAGTGATCA AAGCAGGCAA GGAACTCCAC
ATTCCGAATG CCCTAAAAGA TAAAGACTGG GATAAAAATC CTGATATTAA ACTCGGCATG
ATTGCCTACT GTGGCTTACC TTTACGCTGG CCCGATAACA GCGCCTTTGG CACTATCTGC
ATGCTCGATA ACAAAGAGCA TAATTACAGC CAATCGTTTC GCAGCTTACT CGCTCGTTTT
CAAAATGGTA TAGAAGCCAA CCTAGTCACC CTCTATCAAC AGGCAAAGCT GCAACTGCAC
AACCAAGAGT TAGAGCAAAA AGTGCAACAA CGCACCCATG AACTCGCCGA ACTCAGTAGC
AAACTCATCA AAGAAATCGA AAATCGGACC TCCACCGAAA CCTCACTGGA ATACCATAAA
AGCTATGATC CACTGACGGG ATTACCGAAT CGCATCAATT TGATTAATAG CCTTTCGAGC
ATGCTCGAAG AAGTGAATCG CAAGGAAAAG ATTTCAGTAC TCTATCTGGG GCTGCGTAAT
TTCAAGTCCA TCAACGACAG TTATGGCTAT CTGATTGGCG ATAAAATTCT CACCATTCTC
AGCCAACGTT TACAACACTA TGCCGATGAA AATACCTTCA TAGCCCGTAT TGCCGGCGCC
GAGTTTGTGA TTATTCAAGC TCATAAACCT TCGAACAACG AAACCAACAA ACTCATCAAT
AAAGTGCTTA GCTGCTGTAA TACCCCCTTT GGCGTGGCGG ATTTTGTGAT CACCATTCCA
TCGAGCATGG GTATAGCTCA AGCGCCCATC GATGGCATAG ATGCCGCCAT TCTGCTGCAA
AAAGCAGGGG CTGCGATGAC GATCAGCAAA GCCGATGGCT CAACTCACAG CTTCTTTAAT
CAAGATACTC AAGCGGCTTT GAATCTACGC TATCAACTGG AATCTCACTT AGTCGATGCA
TTGAACAAAA AAGAGTTAAG CCTTCATTAC CAACCCTTTA TTAACTTAAA AACTCAAAAA
GTGATAGGTG CCGAAGCCCT GCTGCGCTGG CACAACCCGA TTCTAGGCAA TGTCGCCCCA
GACAGATTTA TCGCCTTAGC AGAACGTAAT GGCCAGATTA TTGATATCGG TAATTTTGTA
TTGCATACCG CTCTGGCTCA GGCGGCTAAA TGGTGTCGCG AGCTAGACCA GGAGTTTAAA
ATCGCCATCA ATATCTCCCC TTTGCAAATG CGCAATCCCC GTTTTAGCGA GCACATAGCT
GACTTACTCA CCCTCTATCA ATTGCCACCG ACTGCCCTAG AGCTTGAAAT CACCGAAGGC
ATGTTGATGC AGGACGAGCA CATTGCCCAC AATGCCATCC AAAAGCTGCA GGAACTCGGG
ATCCGCATCT CCTTAGATGA CTTTGGTACT GGCTATTCAT CCCTAAGTTA TCTACAAAAA
TACTCTTTCG ACACCTTAAA AATCGATCGC TGTTTTATCA ATAAACTCGA AGAAAACGAA
CAAGATAGGG AGCTCACTAA AGCGATTATT GCAATAGGCA AGAAACTGAA CTTAGTCGTG
ATCGCCGAAG GCGTGGAAAC CCTAGAACAA GATGCCTTTA TTCGTCACGA GGAATGCGAC
TTAGGCCAAG GCTACCTCTA CGGTAAACCC ATCACAGCAC ACGAGTTTGA GCAGGCATTT
ATCCATAAAA AAGAGCATTA A
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| Protein sequence | MPYNLAINQS QKDRLFADIA IDTDKIVVPQ VMVDNWQQTL DLLSELVDTP AALIMRVHQT
DIEVFTSSRT QGNPYKKHDK DSLGHGLYCE TVIKAGKELH IPNALKDKDW DKNPDIKLGM
IAYCGLPLRW PDNSAFGTIC MLDNKEHNYS QSFRSLLARF QNGIEANLVT LYQQAKLQLH
NQELEQKVQQ RTHELAELSS KLIKEIENRT STETSLEYHK SYDPLTGLPN RINLINSLSS
MLEEVNRKEK ISVLYLGLRN FKSINDSYGY LIGDKILTIL SQRLQHYADE NTFIARIAGA
EFVIIQAHKP SNNETNKLIN KVLSCCNTPF GVADFVITIP SSMGIAQAPI DGIDAAILLQ
KAGAAMTISK ADGSTHSFFN QDTQAALNLR YQLESHLVDA LNKKELSLHY QPFINLKTQK
VIGAEALLRW HNPILGNVAP DRFIALAERN GQIIDIGNFV LHTALAQAAK WCRELDQEFK
IAINISPLQM RNPRFSEHIA DLLTLYQLPP TALELEITEG MLMQDEHIAH NAIQKLQELG
IRISLDDFGT GYSSLSYLQK YSFDTLKIDR CFINKLEENE QDRELTKAII AIGKKLNLVV
IAEGVETLEQ DAFIRHEECD LGQGYLYGKP ITAHEFEQAF IHKKEH
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