Gene Shew185_0659 details

Gene Information

• Locus tag: Shew185_0659
• ID: 5371880
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 800400
• End bp: 801053
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640828854
• Product: cold-shock DNA-binding domain-containing protein
• Protein accession: YP_001364880
• Protein GI: 152999199
• COG category: [K] Transcription
• COG ID: [COG1278] Cold shock proteins

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCATGG ATAGGGGCGT GCTGGTACGC TGGAACGATG AAAAGGGATT TGGCTTTATT 
CAGCCTGAAA AAAACGCAGC CCAAGATGTG TTTATTCACA TTTCAGTGCT GAAAAAGATG 
GCGAGAAAAC CCATAGTCGG TGATAGCATT CTGTATCAAA CGGAAGTGCA AAATGACGGC 
AAGAGAAAAG CGGTTATCGC CTCAATTGAA GGCGTCGCTG TTATTGCAGC GAGTGCTACA 
CCGCGCTCCC ACTCTCATGT CCAATCACGC AATGAAAACT TCAACTTCAA CAACAAAAAC 
AAAGCCCATT ACCATAGCCC ACGAAAATCC TCTTTTAATA CGATAATCCC GCTGCTAATA 
ATCGTGGCCA TAGTTATCTT TGGCTTTAAA CAATACCAAG AGTTCAATGA AGCTCCTGCA 
ATCGATGAAG TACCCGTCCT CACGAATGAG GACATTGAGA GAATGCCCAT GTATGAAACT 
AAATCGCGAA CACAAGCAAC GGCAACACCA AGTTTCCAAT GTGAAGCGGG TAAAACCCAT 
TGCAGCCACA TGAGTTCCTG TGCTGAAGCG ACTTTCTATA TCCAACATTG CCCCAATACT 
CAAATGGATG GTGACAATGA TGGCATTCCC TGCGAGCGCC AGTGGTGCAG TTAG 

 

Protein sequence

MLMDRGVLVR WNDEKGFGFI QPEKNAAQDV FIHISVLKKM ARKPIVGDSI LYQTEVQNDG 
KRKAVIASIE GVAVIAASAT PRSHSHVQSR NENFNFNNKN KAHYHSPRKS SFNTIIPLLI 
IVAIVIFGFK QYQEFNEAPA IDEVPVLTNE DIERMPMYET KSRTQATATP SFQCEAGKTH 
CSHMSSCAEA TFYIQHCPNT QMDGDNDGIP CERQWCS