| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0549 |
|---|
| Symbol | |
|---|
| ID | 5369353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 630816 |
|---|
| End bp | 631790 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640828754 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001364780 |
|---|
| Protein GI | 152999099 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACCTTA GCCATAACGC ACCTCAGGCA AATAATCATG CTCAACTCGG GCTGATCTTC
ATCTCAGTTG CGATTGTATT TTGGGGTATG TTACCCATAG CCTTGAAACT TTCGGGGGCT
TTTATCGATC CTGTCACCCT GACGTGGTTT CGTTTTTTAG TCGCGCTTGT GGTCAGCATA
CTGATCCAAT GGAGCGCGGG TAGCCTTAAG CAATTTGCGG CGCTCGATGC CAAAGTCTGG
TTAAGGTTAG TGCTTGCGGG CGTGTTTTTG ATGCTCAATT ATGTGTCTTT TGTTTACTCA
CTCGATTATC TCGCGCCGGG TGCTGCCCAG CTGAATTTCC AGACTTCGCC CTTTTTCCTT
GCCTTCGGTG GCGTGCTGTT TTTTAAGGAA CGGCTGAATG CGGTGCAGCT CAGCTGTTTT
GCAACCTTAG CTTTAGGCAT GTTGATGTTT TTCCATCCGT ATTTGGATTT ATCTGGCGCC
AATAATCATC AGGTTTGGAT TGGGGTGATG ATCATTCAGT TCTCGGCGTT GTCGTGGACT
AGCTATGCCT TGTTGCAAAA ATCCTTATTG AATCGTTTAT CGCCCGCGAA CGTGCTTTTA
GTGATCTATG GCTTAGGTAT TTTCGTAATG GCTCCCTTTA GCGACTTTAG TCAGTTTGCC
AGTATGGACA GCTTTGAGTG GCAGATAGCG CTGTTTTGTG CCGCCAATAC CTTGATCGCC
TATGGCTGTT TTGGGCAGTC GATGAAGTAC TGGCCGACGG CACAAGTGAG CGCCATGTTG
GCCCTAACGC CAGTATTTAG CTTTAGTGCC ACTGCTTTGG TAGTGAGCAT TGGCTGGTGG
CCAGAAGTCT TCCATGCAGA TGAATTAGAT GGATTATCTC TGCTGGGGAT TGGCGTCATT
ATTGTGTCTG TGATGGTGGT ACAATTACTG CCACTGTATC GCAATCGTCA GGCGAAGCGT
TTGCAGATTG TCTAA
|
|---|
| Protein sequence | MNLSHNAPQA NNHAQLGLIF ISVAIVFWGM LPIALKLSGA FIDPVTLTWF RFLVALVVSI
LIQWSAGSLK QFAALDAKVW LRLVLAGVFL MLNYVSFVYS LDYLAPGAAQ LNFQTSPFFL
AFGGVLFFKE RLNAVQLSCF ATLALGMLMF FHPYLDLSGA NNHQVWIGVM IIQFSALSWT
SYALLQKSLL NRLSPANVLL VIYGLGIFVM APFSDFSQFA SMDSFEWQIA LFCAANTLIA
YGCFGQSMKY WPTAQVSAML ALTPVFSFSA TALVVSIGWW PEVFHADELD GLSLLGIGVI
IVSVMVVQLL PLYRNRQAKR LQIV
|
|---|
| |