| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0328 |
|---|
| Symbol | |
|---|
| ID | 5372727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 367984 |
|---|
| End bp | 369183 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640828528 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase I |
|---|
| Protein accession | YP_001364561 |
|---|
| Protein GI | 152998880 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAACA GAGTAGCCAT TACACAGATT GGATTGTGTA CCCCGCTAGG GCAAGATCCC
CAGCAGGTTT TAGACCGCCT GATCGCGGGC GATACCAGCG CGATGCAGCG CAGTGACACA
CTCCTGTTCG AGCACCCAAC CTTAGTTGCG CCAGTAACGG CTGCGCTGCC GGCGATTCCT
GCAAAGCTCA TTCAGTTCGA TTGCCGCAAT AACCAGTTAC TCCTATGCGC GGCGCAGCAA
ATTACCGCCA CGATTGAACA AGCGAAACGG GATTTTGGTC ATACCCGCAT TGGCGTTGTG
CTAGGCACGA GCACCTCGGG GATTTCTAAA GGTGAAGCAG CCCTGAGCTA CCGCAATCAA
CACGGCCACT TTCCGGCGGA TTACCACTAT TTCCAGCAGG AGCTCGGCAG CACTAGCGAC
TTTTTGCGCC AATATTTTGA GCTAGATGGC CCTTGCTACA CGATTTCAAC CGCCTGTTCC
TCCAGCGCAA AAGTCTTTGC CAGTGCTAAA CGCTTACTCA GCGCTAACCT CTGCGACATG
GTGATTGTTG GCGGTGTCGA CAGTTTGTGC CAACTGACAG TCAATGGTTT TAATGCTTTG
GAATCTGTAT CCAAAGGCCA CTGCAATCCC TTTAGTATCA ACCGTGATGG CATTAATATT
GGCGAAGGCG CGGCCTTATT CGTGCTGACG GCGGGCGAGT CCGATGTCAT GCTGGCTGGC
ATTGGCGAGT CGAGCGATGC CCATCATATT TCCGCACCTC ATCCCGAAGG CGCTGGCGCA
ATCACCGCCA TGCAAGCGGC TTTGCAAGAT GCAAATATTG CGGCACAAGA TATTGGTTAC
ATTAACTTAC ACGGCACAGC GACACCCAAA AATGATGCGA TGGAAAGCCG TGCTGTGGTT
GAAGTCTTTG GCGTCAACAC CCCGCCCTGC AGCTCGACCA AACCCTTAGT CGGCCATACC
TTAGGTGCCG CTGGCGCGAT TGAAGCCGCC TTCTGCTATT TATTGCTTTC GGCACATAAT
CACGGCCAAG CCCTGCCGCC CCATCAATGG GACGGACAAG TCGATCCACT GGACCCGACC
ATTGCCTTAG TCGAACGCCA TCAAGTCGCC GCAAAAGGCA CACTTAATTA TGTGATGAGT
AATTCCTTCG CCTTTGGCGG CAGCAATGCC AGCCTGATTT TTTGCCGTAA CGAGGCCTAA
|
|---|
| Protein sequence | MMNRVAITQI GLCTPLGQDP QQVLDRLIAG DTSAMQRSDT LLFEHPTLVA PVTAALPAIP
AKLIQFDCRN NQLLLCAAQQ ITATIEQAKR DFGHTRIGVV LGTSTSGISK GEAALSYRNQ
HGHFPADYHY FQQELGSTSD FLRQYFELDG PCYTISTACS SSAKVFASAK RLLSANLCDM
VIVGGVDSLC QLTVNGFNAL ESVSKGHCNP FSINRDGINI GEGAALFVLT AGESDVMLAG
IGESSDAHHI SAPHPEGAGA ITAMQAALQD ANIAAQDIGY INLHGTATPK NDAMESRAVV
EVFGVNTPPC SSTKPLVGHT LGAAGAIEAA FCYLLLSAHN HGQALPPHQW DGQVDPLDPT
IALVERHQVA AKGTLNYVMS NSFAFGGSNA SLIFCRNEA
|
|---|
| |