| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0325 |
|---|
| Symbol | |
|---|
| ID | 5371331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 365284 |
|---|
| End bp | 366543 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640828525 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
|---|
| Protein accession | YP_001364558 |
|---|
| Protein GI | 152998877 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG CGACAAATCA AACACGTTTA GGTAAGCGAG TGGTCATCAC AGGCATTGGC
GGGATTACCG CACTAGGCCA TGATTGGCCG ACGATAGCGG CGAGCCTTAA GGCGCAGAAA
AACTGCGTCG TCACTATGAG TGACTGGGAT AGATACGACG GCCTCAACAC CCGTTTAGCC
GCGCCAATTA CTGACTTTGA AGTGCCAAGC CATTATTCAC GCAAGAAAAT TCGTTCTATG
GGTCGGGTTT CCATCATGGC GACTCGCGCC AGTGAGCTTG CTTTACTCGA TGCGGGGTTG
TTGGATGACC CTATCGTGTC CTCGGGTGAA ATGGGCATCG CCTACGGTTC ATCCACGGGC
AGTACCGATC CTATAACCGC CTTTGGCGAT ATGCTGAAAA CCGGTGATAT GTCGGGCGTC
ACCGCCACTA GCTATATCCG CATGATGGCG CACACCACAG CGGTGAACGT TGGCGTATTC
TTCGGCTTAA AGGGCCGAAT TCACACCACC AGCAGCGCAT GCACTTCGGG GAGCCAAGGC
ATAGGTTATG CCTATGAAGC CATCAAATAC GGTCAGCAAA CCTTAATGCT AGCGGGCGGC
GGCGAAGAAC TCTGTCCCAC CGAAGCTGTG GTGTTCGATA CCCTGTTTGC CACCAGCACT
AAAAACTCGA CGCCCGAACT CACGCCACGC CCCTTTGATG CAGATCGCGA TGGCCTCGTC
ATTGGCGAAG GGGCTTGTAC ACTGGTGCTC GAAGAGCTCG AACACGCCAA GGCGCGTGGC
GCAAAAATTT ATGCTGAGTT AGTCGGTTTT GGCACAAATT CCGACGGTCA ACACGTCACC
CAACCGAATG CGCAGACCAT GGAAATCGCC ATCAGATTAG CCCTCAAAGA TGCGCAGCTT
GAGCCTAGCG CCATAGGTTA TGTGAACGCC CACGGCACAG CAACCGACCG TGGTGACATT
GCCGAGAGTC ACGCGACTCA AGCAGTGTTT GGCGCTGAGA CGCCAATATC ATCCCTTAAA
AGCTACACAG GCCACACCTT AGGCGCATGC GGCGCGTTAG AAGCTTGGGT GAGTATTGAG
ATGATGAATG CGGGCTGGTT TGCGCCAACA CTCAATCTTG AGAATATCGA CCCACAGTGC
GCCGATTTGG ACTATATCCG CAACGAACTG CGCCCAATCG ACACGGATTA TGTGATGAGT
AATAATTTCG CATTTGGCGG CATTAATACC TCGCTGATTT TTAAACGCTG GACCAGATAA
|
|---|
| Protein sequence | MSEATNQTRL GKRVVITGIG GITALGHDWP TIAASLKAQK NCVVTMSDWD RYDGLNTRLA
APITDFEVPS HYSRKKIRSM GRVSIMATRA SELALLDAGL LDDPIVSSGE MGIAYGSSTG
STDPITAFGD MLKTGDMSGV TATSYIRMMA HTTAVNVGVF FGLKGRIHTT SSACTSGSQG
IGYAYEAIKY GQQTLMLAGG GEELCPTEAV VFDTLFATST KNSTPELTPR PFDADRDGLV
IGEGACTLVL EELEHAKARG AKIYAELVGF GTNSDGQHVT QPNAQTMEIA IRLALKDAQL
EPSAIGYVNA HGTATDRGDI AESHATQAVF GAETPISSLK SYTGHTLGAC GALEAWVSIE
MMNAGWFAPT LNLENIDPQC ADLDYIRNEL RPIDTDYVMS NNFAFGGINT SLIFKRWTR
|
|---|
| |