Gene Shew185_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0293 
Symbol 
ID5373364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp333013 
End bp333525 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content46% 
IMG OID640828494 
Productpeptidase M23B 
Protein accessionYP_001364527 
Protein GI152998846 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000339642 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAA CATATGTTGG ATTAGCACTA TCGTTACTGC TACTTGGCGG CTATCTGATC 
CCTGAGTCAC CGGTGATCCC AGTCAAAGGC GCCAGCAGTA AAGATTGGAA CAGCCAAACC
TTTTGGTATG AACCTTGGGG GCCATCGGGC GTTCACAAGG GGATAGATAT TTTCGCCGCC
AAAAACACCG CCGTGATTGC GCCAACGCCT ATGCTGATCT TCTATCGAGG CGACTTCTTT
AAAGGAGGCA ATGTGGTCGT TGGTCTAGGT CCTAAATGGC AAATTCATTA CTTTGCCCAT
TTAGCACAAA TTGAATCAGC CACGGGATTA ATTGCCCACC AAGGTGAAAC GCTGGGTACT
GTCGGCGATA CGGGCAATGC TCAAGGTAAA CCGCCACATT TGCATTATTC CATTTTGAGC
TTATTGCCTA AACCTTGGCT GATAGATACT TCAACCCAAG GATATAAAAA GGCCTTTTAT
CAGAATCCCA TCAGCTACTT AGAAACACAC TAA
 
Protein sequence
MKLTYVGLAL SLLLLGGYLI PESPVIPVKG ASSKDWNSQT FWYEPWGPSG VHKGIDIFAA 
KNTAVIAPTP MLIFYRGDFF KGGNVVVGLG PKWQIHYFAH LAQIESATGL IAHQGETLGT
VGDTGNAQGK PPHLHYSILS LLPKPWLIDT STQGYKKAFY QNPISYLETH