| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0227 |
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| Symbol | |
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| ID | 5372697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 262261 |
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| End bp | 262947 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640828424 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_001364461 |
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| Protein GI | 152998780 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00610069 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGAG GCATCAGTTT TACCCAGGCA TTTTTCACCT TGCTGCAGCG AGATCTTAAA
ATTGCCATTC GTCACCGCGG CGACATTTTT AACCCACTGC TATTTTTTAT TATGGTTGTG
ACCTTATTCC CACTGGGGAT TGGCCCAGAG CCACAAATGT TAGCCCGTGT GGCTCCTGGG
ATAATTTGGG TTGCAGCGTT ATTAGCCTCT ATGTTGTCAC TTGAAAGACT GTTCAAAGCG
GACTTTAGTG ATGGCAGCTT AGAGCAAATG TTATTGAGCC CACAGCCATT AGCCATTCTG
GTATTAGCCA AAGTGTTAGC CCATTGGATT TTAACCGGTG TGCCACTGAT TATTATTGCG
CCACTGTTAG CGGTGCTACT CAATTTAGAT GGCAATAGTT ATGGTGCGTT AATATCGACC
CTTGCGCTAG GCACGCCAGT ATTATCGCTA TTAGGTGCCA TTGGTGTGGC ATTAACCGTC
GGCCTTAGAA AAGGTGGCGT GTTACTCAGC TTACTTATTT TGCCCTTGTA TATTCCGGTT
CTCATTTTTG CAACGAGTGC CATAGACGCG GCAGGAATGA ATTTACCCTA TGACGGTCAG
CTCGCTATAA TAGGCGCTAT GCTGGTCGGA TCGTTAACCT TAGCACCTTT TGCAATTGGT
GCATCTCTGC GAGTGAGTAC TAACTAA
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| Protein sequence | MKRGISFTQA FFTLLQRDLK IAIRHRGDIF NPLLFFIMVV TLFPLGIGPE PQMLARVAPG
IIWVAALLAS MLSLERLFKA DFSDGSLEQM LLSPQPLAIL VLAKVLAHWI LTGVPLIIIA
PLLAVLLNLD GNSYGALIST LALGTPVLSL LGAIGVALTV GLRKGGVLLS LLILPLYIPV
LIFATSAIDA AGMNLPYDGQ LAIIGAMLVG SLTLAPFAIG ASLRVSTN
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