Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0225 |
Symbol | |
ID | 5372695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 261313 |
End bp | 261513 |
Gene Length | 201 bp |
Protein Length | 66 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640828422 |
Product | Heme exporter protein D (CcmD) |
Protein accession | YP_001364459 |
Protein GI | 152998778 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3114] Heme exporter protein D |
TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0435599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTCG ATTCAATCAG TGATTTTTTT AATATGGGCG GCTATGCATT TTACGTGTGG CTATCCTACG GAGTGACCTT CTTCTGCCTC TCAACGCTTA TCATTACCAG CGCACGCCAA AAGCGTAAGG TGTTAATTGA AATCGCGAAG AAGATGGATA GAGAAGAACG CCTAAAAGAA ACTAGGAGTA CTAAATCGTG A
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Protein sequence | MQFDSISDFF NMGGYAFYVW LSYGVTFFCL STLIITSARQ KRKVLIEIAK KMDREERLKE TRSTKS
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