| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0216 |
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| Symbol | secY |
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| ID | 5371204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 255167 |
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| End bp | 256507 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640828413 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001364450 |
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| Protein GI | 152998769 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000065492 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC CAGGACTTGA TTTAAAAAGC GCGAAAGGTG GACTTTCAGA ATTGAAAGCT
CGCCTCCTGT TCGTGATTGG TGCGATTATC GTCTTTAGAG CCGGTTCGTT TGTGCCAATT
CCTGGTATTG ACGCAGCTGT ATTAGCAGAG CTGTTTGCTC AGCAAAAAGG GACCATCCTG
GGCATGTTTA ACATGTTCTC GGGTGGCGCC CTTTCGCGTG CCTCTATCTT TGCATTAGGT
ATCATGCCGT ATATTTCGGC ATCGATTATC ATGCAACTGT TGACTGTCGT ACATCCTGCA
CTCGCTGAAT TGAAAAAAGA AGGCGAATCA GGTCGTAAGA AAATCAGTCA ATATACCAGA
TGGGGTACCT TAGTGCTGGG TACATTCCAG TCGGTCGGTA TTGCAACCGG GTTACCAAAC
TTAGTGCCAG GCCTTGTGGT CAACATTGGA TTTGGGTTCT ACTTTGTTGC GGTTGTGAGC
TTAGTGACGG GAACGATGTT CCTTATGTGG CTAGGTGAGC AGATTACCGA ACGTGGTATA
GGTAACGGTA TCTCGATTTT GATTTTCGCA GGTATTGTTG CTGGATTACC TTCCGCTATC
GGCCAAACGG CTGAGCAGGC GCGTCAAGGT GACTTGAATG TGTTAGTATT GTTGTTGCTC
GCGGTAATTG TGTTTGCAGT GACTTATTTT GTAGTGTTTG TGGAACGTGG TCAGCGTCGT
ATCGTCGTTA ACTATGCTAA GCGTCAGCAG GGCCGTAAGG TGTTCGCTGC GCAAAGTACT
CACTTACCGC TTAAAATAAA CATGGCAGGT GTTATTCCGC CAATTTTTGC GTCAAGCATC
ATTTTGTTCC CTGGAACACT GGCTCAGTGG TTCGGTCAAA ATGAATCCAT GTCATGGTTA
AGTGATTTTT CACTGGCTGT GTCACCTGGA CAACCGCTTT ACTCATTATT ATATGCAACA
GCGATTATCT TTTTCTGTTT CTTCTATACT GCGTTGGTAT TTAACCCACG CGAAACAGCA
GATAACTTGA AGAAGAGTGG TGCATTCATC CCTGGGATCC GTCCTGGAGA ACAGACTTCG
CGTTACATTG ATAAAGTTAT GACCCGTTTG ACATTGGCAG GCGCGTTATA CATAACCTTT
ATCTGCTTAA TTCCGGAGTT CATGTTAATC GCGTGGAAAG TACAGTTCTA TTTTGGCGGT
ACTTCACTAC TAATTATGGT AGTCGTGATC ATGGACTTCA TGGCTCAGGT TCAGACGCAT
ATGATGTCTC ATCAGTATGA GTCTGTGATG AAGAAAGCTA ACCTAGTAAA CAAAGCGAAT
TTAGATCGCT TTGGTCGCTA A
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| Protein sequence | MAKPGLDLKS AKGGLSELKA RLLFVIGAII VFRAGSFVPI PGIDAAVLAE LFAQQKGTIL
GMFNMFSGGA LSRASIFALG IMPYISASII MQLLTVVHPA LAELKKEGES GRKKISQYTR
WGTLVLGTFQ SVGIATGLPN LVPGLVVNIG FGFYFVAVVS LVTGTMFLMW LGEQITERGI
GNGISILIFA GIVAGLPSAI GQTAEQARQG DLNVLVLLLL AVIVFAVTYF VVFVERGQRR
IVVNYAKRQQ GRKVFAAQST HLPLKINMAG VIPPIFASSI ILFPGTLAQW FGQNESMSWL
SDFSLAVSPG QPLYSLLYAT AIIFFCFFYT ALVFNPRETA DNLKKSGAFI PGIRPGEQTS
RYIDKVMTRL TLAGALYITF ICLIPEFMLI AWKVQFYFGG TSLLIMVVVI MDFMAQVQTH
MMSHQYESVM KKANLVNKAN LDRFGR
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