Gene Shew185_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0118 
Symbol 
ID5369676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp141419 
End bp142042 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content50% 
IMG OID640828306 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001364352 
Protein GI152998671 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCCG AAACTTGGTT ACTCTATCTC TTCGCCATTG TATTGATTGG GATCTCACCA 
GGCCCCATCG CTATGTTGTC TATGTCCCAC GGGATCCATT TCGGCAAGAT GCGCAGCATG 
GCCACCGGCC TTGGCAGTGT GAGTGCCGCT TTAGTCTTGA TGATGGCGTC AGCAGCGGGA 
TTAGGCGCCA TTATCAGCGC CTCAGAATAC GGTTTTACCC TGCTAAAATG GTGCGGTGCG 
GCCTATTTAG TATTTTTAGG GATCAAGCTG CTGTTGACCA AAAACCAAGG TCAAACCCTT 
GAGGTTAGCC AATTAAAAGG CAAAGGCACG CCAAGGCAAC TTTATCAGCA GGCGTTTCTG 
GTGGGGATCA GTAATCCAAA GGATTTACTG TTTTTTGCCG CGCTGTTTCC GCAATTTATC 
GATCTTGCCG CGCCGCAATT ACCGCAACTT ATGATACTAG CAGCCACTTG GGCCGTGGTG 
GATTTTAGCT TTGTGATGAT TTACGCCAGC ATGGCCAATG TGCTTGCGCC CAGCCTAAAG 
GCGAGCAACA AGCTGCATTG GTTTGACAGA ACCAGCGGCG GTGTCTTTCT TACCTTAGCC 
GCGATTCTTA TCTCTCGAAA TTAA
 
Protein sequence
MQPETWLLYL FAIVLIGISP GPIAMLSMSH GIHFGKMRSM ATGLGSVSAA LVLMMASAAG 
LGAIISASEY GFTLLKWCGA AYLVFLGIKL LLTKNQGQTL EVSQLKGKGT PRQLYQQAFL 
VGISNPKDLL FFAALFPQFI DLAAPQLPQL MILAATWAVV DFSFVMIYAS MANVLAPSLK 
ASNKLHWFDR TSGGVFLTLA AILISRN