| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0011 |
|---|
| Symbol | |
|---|
| ID | 5371618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 13745 |
|---|
| End bp | 16933 |
|---|
| Gene Length | 3189 bp |
|---|
| Protein Length | 1062 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640828196 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001364247 |
|---|
| Protein GI | 152998566 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAT CTAAACTTAC CCCGCTTTAT ATCGCCCTCG CTCTAGGTAT GAATACCCTC
GCCGTTAACG CAGCAGAAAC GAAGGAGGCC GAATGGAATG TTAACGCTCC AGCAAATGCT
CCCTTAGAGC AAGTCAAAAT TGATGTTAAT GAAGGCACTT GGATGAACCT TAGTGTCAGT
CCAGATGGCA AGCATATCGT CTTCGACTTG CTCGGCGACA TTTACCAAAT CCCAGTAACC
GGCGGTGAAG CTAAGCCATT AGCCCAAGGC ATTGCTTGGC AGATGCAGCC CGTCTATAGC
CCAGATGGCA AACACATCGC ATTTACCTCG GATGGCGATG GTGGTGATAA CATTTGGATC
ATGGATGCCG ATGGTAGCAA TCCACGAACT GTCACCCAAG AAACATTCAG GCTGCTAAAC
AGTCCCGCTT GGAGCCCTGA CTCTCAGTAT CTTGTTGCAC GTAAGCATTT TACCGCCAGC
CGCAGTTTAG GTGCTGGTGA AGTGTGGCTA TACCACGTAG CGGGCGGCGA AGGCGTCAAA
CTAACTGAAC GCCCAAATGA TCAGAAAGAT TTAGGCGAAC CCGCGTACTC GCCCGATGGC
CGTTATATCT ACTTTAGCCA AGATGATACG CTAGGCAAAA CATTCCACTA TTCAAAGGAC
TCAGTTAACG GTATCTACAA AATCAAACGT TATGATACCC AAACCGGTGA CATTGAAATT
TTGATTGAAG GTACCGGTGG TGCAATTCGA CCAACACCAA GTCCTGATGG CACTAAGCTC
GCCTATATAA AGCGCGATGA TTTTAATTCG TCACTCTACC TGCTCGACCT CAAGTCTGGT
GAAACCACTA AACTGTTTGG CGAACTAGAC CGTGATATGC AAGAGACTTG GGCGATTCAT
GGCGTCTACC CGACAATGGC GTGGACTCAA GATAACAAGG ATATTTTCTT CTGGGCGAAG
GGAAAGATTA ACCGCCTGAA TGTTGCCAGC AAAACACTCA CAGATATCCC CTTTAGCGTA
AAAACTGAGT TAGCAGTACA ACCCTCAGTG CGCTTTAAGC AAGATATAGA TAAAGATGTT
TTCGATGTCA AAATGCTACG TATGGCGCAG GTCTCTCCCG ATGGCAGTAA AGTGGCCTTC
GAAGCGCTGG GTAAGATTTG GTTAAAATCA TTACCCGATG GAAAAATGTC GCGCTTAACT
GAACTCAATA ATGGGATTGA AGAACTGTAT CCCCAATGGT CCCGCGATGG CAAAAATATT
GTTTTCACCA CTTGGAATGA CCAAGACCAA GGAACAGTAC AAGTCATTAG CGCCAAAGGT
GGCAAACCTA AGCAGCTAAC ATCTGAACCA GGAAAGTACG TAGAACCCAC CTTTTCACCC
GATGGTGAAC TTGTGGTGTA TCGCAAAACC CATGGCGGTA ACCTCACACC AAGAACTTGG
TCGCAGGAGC CTGGACTATA TAAAGTCGAT ATCAAAGGCA AACAAAATAA GAAAATCAGT
GCCGATGGCT ACCAAGCTCA ATTCGGTGCC AATGCCGATC GCGTCTTTTT TATGAATAGC
AGCGAAGATG AAACGCCACA GTTATCATCT ATCAACTTAG ATGGCTTCGA TAAACGGGTT
CATTACAGCA GCAAGCATGC GACTGAATTT AGAGTTTCAC CCGATGGTGA GCAACTCGCC
TTTGCCGAAC GCTTTAAGGT TTGGGTGACT CCTTTTGCTA AACACAGCGA AACTGTAGAG
ATTGGACCCA ATGCCAACAA TCTACCCGTA AGCCAATTGA GTATCCACGC CGGTGAAAGT
ATTAGTTGGA ACAGTAAAAG CAACCAACTG TATTGGACGC TTGGCCCTGA ACTTTATCAA
GCCAAGGTTG ATACTCAATA TCTTAATAAA GATGAAAAGG CTCAGCCAAG CATTATCAAT
TTAGGCTTTA CCGAAAAGGC CGATGTTCCA CGTGGAACAA TCGCCTTCAT CGGTGGCAAA
GTAATTACAA TGGAAAATGA CCAAGTCATC GACAATGGCG TGGTCATAGT CAAAGACAAT
CATATTGTCG CCGTAGGTGA TGCCAATATC GCGATTCCAA AAGATGCACA GATCATCGAC
ATCAAAGGAA AATCGATCAT GCCAGGGCTA TTCGATGCCC ACGCCCATGG ACCTCAAGCA
GATGATGAAA TTGTGCCACA ACAGAACTGG GCGCTTTATT CCGGTTTATC TTTGGGTGTC
ACCACTATTC ACGATCCCTC GAATGACACG ACAGAGATTT TTGCCGCTTC CGAACAACAA
AAAGCAGGAC ACATAGTTGG CCCACGTATC TTCTCTACTG GTACCATATT GTATGGTGCC
AATGCGCCAG GTTACACATC GCACATAGAC TCACTCGATG ATGCCAAATT TCATCTTGAA
CGTCTGAAAA AAGTCGGGGC GTTTAGCGTT AAAAGCTACA ACCAACCGCG ACGTAATCAG
AGGCAGCAAG TCATCGCTGC CGCACGTGAA CTCGAAATGA TGGTCGTGCC TGAAGGTGGC
AGTTTGCTAC AGCACAATCT CACTATGGTC GCCGATGGCC ACACAACGGT TGAGCACTCT
CTGCCAGTAG CAGCGATTTA TAATGATATC AAACAATTCT GGAGCCAGAC TAAAGTCGGT
TACACCCCAA CCTTAGTGGT CGCCTATGGC GGCATTTCAG GCGAAAACTA CTGGTACGAC
AAAACCGATG TGTGGGCGCA TCCACGCCTG TCCATGTATG TCCCCGCCGA TATCTTGCAG
GCGAGATCAA TGCGACGCCC GCATGCTCCA GATGGCCACT ATAATCATTT CAATGTTGCA
AAAGTCGCTA ACGAGCTCAA TAAGTTAGGA GTCCACCCAA ATATTGGCGC CCACGGTCAG
CGTGAAGGTT TAGCGGCACA TTGGGAAATG TGGATGTTCG CCCAAGGCGG CATGAGCAAT
ATGGAAGTAT TGAAAACGGC CACCATTAAT CCGGCGACGA CCTTTGGTAT GGAACAACAG
CTAGGCTCGA TTAAAGAAGG TAAGCTCGCA GACTTAATCG TTATTGATGG TGATCCATTA
GCCGACATAC GCGTCACAGA TAAAGTCACT TATACCATGG TCAATGGTAA GCTTTTTGAT
GCTGAGACGA TGAATGAGCT TAATGGGGAT AAGGAAAAAC GTAAGCCATT TTTCTTTGAG
AAAATCTAA
|
|---|
| Protein sequence | MLKSKLTPLY IALALGMNTL AVNAAETKEA EWNVNAPANA PLEQVKIDVN EGTWMNLSVS
PDGKHIVFDL LGDIYQIPVT GGEAKPLAQG IAWQMQPVYS PDGKHIAFTS DGDGGDNIWI
MDADGSNPRT VTQETFRLLN SPAWSPDSQY LVARKHFTAS RSLGAGEVWL YHVAGGEGVK
LTERPNDQKD LGEPAYSPDG RYIYFSQDDT LGKTFHYSKD SVNGIYKIKR YDTQTGDIEI
LIEGTGGAIR PTPSPDGTKL AYIKRDDFNS SLYLLDLKSG ETTKLFGELD RDMQETWAIH
GVYPTMAWTQ DNKDIFFWAK GKINRLNVAS KTLTDIPFSV KTELAVQPSV RFKQDIDKDV
FDVKMLRMAQ VSPDGSKVAF EALGKIWLKS LPDGKMSRLT ELNNGIEELY PQWSRDGKNI
VFTTWNDQDQ GTVQVISAKG GKPKQLTSEP GKYVEPTFSP DGELVVYRKT HGGNLTPRTW
SQEPGLYKVD IKGKQNKKIS ADGYQAQFGA NADRVFFMNS SEDETPQLSS INLDGFDKRV
HYSSKHATEF RVSPDGEQLA FAERFKVWVT PFAKHSETVE IGPNANNLPV SQLSIHAGES
ISWNSKSNQL YWTLGPELYQ AKVDTQYLNK DEKAQPSIIN LGFTEKADVP RGTIAFIGGK
VITMENDQVI DNGVVIVKDN HIVAVGDANI AIPKDAQIID IKGKSIMPGL FDAHAHGPQA
DDEIVPQQNW ALYSGLSLGV TTIHDPSNDT TEIFAASEQQ KAGHIVGPRI FSTGTILYGA
NAPGYTSHID SLDDAKFHLE RLKKVGAFSV KSYNQPRRNQ RQQVIAAARE LEMMVVPEGG
SLLQHNLTMV ADGHTTVEHS LPVAAIYNDI KQFWSQTKVG YTPTLVVAYG GISGENYWYD
KTDVWAHPRL SMYVPADILQ ARSMRRPHAP DGHYNHFNVA KVANELNKLG VHPNIGAHGQ
REGLAAHWEM WMFAQGGMSN MEVLKTATIN PATTFGMEQQ LGSIKEGKLA DLIVIDGDPL
ADIRVTDKVT YTMVNGKLFD AETMNELNGD KEKRKPFFFE KI
|
|---|
| |