| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_28230 |
|---|
| Symbol | |
|---|
| ID | 8396711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 3128910 |
|---|
| End bp | 3129992 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644987562 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_003145162 |
|---|
| Protein GI | 257065490 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.81935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.292864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGAG TTTACAATTT CTCGGCCGGC CCCGCTGTGC TGCCTGAGGA GGTTCTGCAA
GCAGCTGCAA ATGATATGCT TGATTACAAG GGCTGCGGCA TGTCAGTCAT GGAGATGAGC
CACCGTTCAA AGATGTTTGA GGAAATCATC ACCGAGGCGG AGCAGGATCT GCGTGACCTC
ATGGGCATTC CTGACAACTA CCGCGTCCTG TTCCTGCAGG GCGGCGGCAG CATGCAGTTC
GCCCAGGTTC CGTTGAACCT GATGAAGACC GGCGTGGCCG ACTACATCGT CAGCGGCTCC
TGGTCGAAGA AGGCTTGGAA GGAGGCCAAG AAGTTCGGCG ACGCCCGCTG CATCGCCAGC
TCCGAGGACA AAACCTTCTC TTACATTCCC GACGTGGACG CTCTGGAAAT CGACGACGAC
GCCGACTACG TCTACATCTG CGAGAACGAG ACCATTTACG GCACCAAGTA CCACAAACTT
CCCGACACCA AAGGCAAACC GCTGGTCGCG GACGTTTCGT CCTGCTTCCT GAGCGAGCCC
GTCAACGTTG AAGACTACGG CGTCATCTTC GGCGGCGTCC AGAAGAACGT AGGCCCCGCC
GGCGTGGCTA TCGTCATCAT CCGCGAGGAC CTCATCCCCG AAGAAGAGCT GCCGAACGTT
CCCACCATGC TTCAGTACAA GACCCAGGCC GACGCGAAAA GCCTGTACAA CACGCCTCCG
TGCTGGGGCA TCTACATTTG CGGCCTCGTG TTCAAGTGGT TGAAGGCGAA CGGCGGTCTC
GAGGGCGCCA AGCGGCGCAA CGTCGAGAAG GCCCAGCTCC TGTACGACTA TCTGGACCAG
AGCAAACTCT TCAAGGCAAC CGCCGCCAAG GAAGACCGCT CCCTCATGAA CATCCCGTTC
GTCACCGGCG ACAAGGACCT GGATGCCAAG TTCGTGGCCG AGGCCAAGGC TGCCGGCCTT
GAGAACATCA AGGGCCACCG CAGCGTCGGC GGCATGCGCG CCAGCATCTA CAACGCCATG
CCCAAGGCCG GCGTCGAAGC TCTGGTCGAG TTCATGAAGA AGTTCGAAGC CGAAAACGCC
TAG
|
|---|
| Protein sequence | MGRVYNFSAG PAVLPEEVLQ AAANDMLDYK GCGMSVMEMS HRSKMFEEII TEAEQDLRDL
MGIPDNYRVL FLQGGGSMQF AQVPLNLMKT GVADYIVSGS WSKKAWKEAK KFGDARCIAS
SEDKTFSYIP DVDALEIDDD ADYVYICENE TIYGTKYHKL PDTKGKPLVA DVSSCFLSEP
VNVEDYGVIF GGVQKNVGPA GVAIVIIRED LIPEEELPNV PTMLQYKTQA DAKSLYNTPP
CWGIYICGLV FKWLKANGGL EGAKRRNVEK AQLLYDYLDQ SKLFKATAAK EDRSLMNIPF
VTGDKDLDAK FVAEAKAAGL ENIKGHRSVG GMRASIYNAM PKAGVEALVE FMKKFEAENA
|
|---|
| |