| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_28010 |
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| Symbol | |
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| ID | 8396689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 3101002 |
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| End bp | 3102813 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644987540 |
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| Product | GTP-binding protein TypA/BipA |
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| Protein accession | YP_003145141 |
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| Protein GI | 257065469 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGG AAAACATCCG CAACGTGGCG ATTATCGCCC ACGTTGACCA CGGCAAAACC
ACGCTGGTGG ACCGCCTTCT GTATGCGGCA AACGTGTTCC GCAGCAACCA GCAGGTCGAA
GAGCGCGTGC TCGACAGCAA CGACCAGGAA CGTGAACGCG GCATCACCAT CCTGTCCAAG
AACATCTCCA TTCAGTACAA GAATGTGAAG ATCAACGTCA TCGACACCCC GGGCCACGCC
GACTTCGGCG GCGAGGTGGA GCGCGTGCTC AACATGGCCG ACGGCGCGTT GCTGATCGTG
GACGCCTTCG AAGGCCCCAT GCCGCAGACC CGCTTCGTGC TTTCGCACGC TCTTGACCAG
GGCCTGCGCA TCGTGCTTGT CATCAACAAG ATCGACCGTC CGGGTTCGCG TCCCGAAGAG
GTGCTGGACG AGGTCTTCGA TCTGATGGTC GAACTGGGCG CCTCCGACGA GCAGCTCGAC
TTCCCCGTGG TGTACGCTTC CGCCGTCAAC GGCTTCGCCC GCTACGAGTA CGACGACGAC
AACATGGATA TGGTGCCCCT GCTGGACACC ATTCTGAAGG AAATCCCTGC TCCCGAGGTT
GATCCCGACG GTCCTGTGGC GCTGCAGATC TGCACCGTGG ACCACTCCAG CTTCGTGGGC
CGCATCGGCG TGGGCCGTCT GCACAGCGGT ACCATGCACA AGAACGAGCA GGTGCTGGTC
ATCAAGAACA ACGGCACCCG CTACAACACC GTCATCAAGC AGGTGTTCAC CTTCGAGGCC
CTGGGCAAGG CCGAGGTGCA GGAGGTCAGC GCAGGCGACA TCATCGCGGT GGTCGGTGTC
GACGATGCCG ACATCGGAGA TATGGTCACC AGCCGCGAGA ACCCCGTGCG CCTGGACCCC
ATCGCCGTGG AGGAGCCCAC GATGGCCGTC GTGTTCGAGG CATCCAGCAG CCCGCTGGTC
GGCCGCGAAG GCGAAATCGT CGGTTCACGC CAGCTCAACG AGCGCCTCAT GCGTGAGGCC
GAAAGCAACA TCTCCATGCG CATCGAGCCG CTGGAGGAAG GCTCCGGCAT TTCCGTGGCA
GGCCGCGGCG TTCTGCATCT GTCCGTTCTT ATGGAAACCA TGCGTCGCGA AGGCTTCGAA
TTCCAGGTCG GCCGCCCGCA GGTCATCATC AAGACCGATG AGCAGGGCCG CAAGCTCGAG
CCCATCGAGG AGGCAACCGT CGACGTGCCC AGCGAATACG CCGGCAAGGT CATCGAGGTG
TTCGGCAACG CCGGCGGCGA GATGACCGAC ATGTTCACCC GCGAGGACCA GACCCACCTG
GTGTTCAAGA TTCCGTCTCG CGGCACCATG GGCCTGAAGA CCAGGCTGCT CAACGCTACC
CATGGCGAAG CGAACATGTT CCACCACTTC AGCGAGTACG GCGCCTACCG CGGCGAGTTC
GCCGGCCGCA AGAACGGCAG CATGATCGCC ATGTCCACGG GCAAATCGGT GGCCTACGCG
CTTGATACGT TGCAGCAGCG CGGCCGCATG TTCGTCGGTC CGGGCGAGGA CTGCTACGAG
GGCATGATCG TGGGCGAAAG CGCCAAAGAG GGCGACATGG TCGTAAACGT GGAGAAGGCC
AAGCAGCTGG GCAACCAGCG TTCTTCCGGC GCCGACAAGG CAATCCAGCT GACGCCGCCG
GTTACCTTCA CGTTGGAAGA GGCCCTGGAG TACATTCAGG ACGACGAGCT GGTGGAGGTC
ACCCCTAAGA GCATCCGCCT GCGCAAGCGC CTGCTTTCCG CCATCGACCG CAAGAAGGCC
AACAAGCAGT AG
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| Protein sequence | MKQENIRNVA IIAHVDHGKT TLVDRLLYAA NVFRSNQQVE ERVLDSNDQE RERGITILSK
NISIQYKNVK INVIDTPGHA DFGGEVERVL NMADGALLIV DAFEGPMPQT RFVLSHALDQ
GLRIVLVINK IDRPGSRPEE VLDEVFDLMV ELGASDEQLD FPVVYASAVN GFARYEYDDD
NMDMVPLLDT ILKEIPAPEV DPDGPVALQI CTVDHSSFVG RIGVGRLHSG TMHKNEQVLV
IKNNGTRYNT VIKQVFTFEA LGKAEVQEVS AGDIIAVVGV DDADIGDMVT SRENPVRLDP
IAVEEPTMAV VFEASSSPLV GREGEIVGSR QLNERLMREA ESNISMRIEP LEEGSGISVA
GRGVLHLSVL METMRREGFE FQVGRPQVII KTDEQGRKLE PIEEATVDVP SEYAGKVIEV
FGNAGGEMTD MFTREDQTHL VFKIPSRGTM GLKTRLLNAT HGEANMFHHF SEYGAYRGEF
AGRKNGSMIA MSTGKSVAYA LDTLQQRGRM FVGPGEDCYE GMIVGESAKE GDMVVNVEKA
KQLGNQRSSG ADKAIQLTPP VTFTLEEALE YIQDDELVEV TPKSIRLRKR LLSAIDRKKA
NKQ
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