Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_27520 |
Symbol | |
ID | 8396640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 3047315 |
End bp | 3048421 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644987494 |
Product | transposase |
Protein accession | YP_003145099 |
Protein GI | 257065427 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0618787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACATG TTACCTCCAT CGGACTAGAC GTGCACGCCA GATCGATCAA GGCGTGCGCC TTCAACCCGT TCACAGGGGA GGTCGCGCGG CGCTCTTTCG CGTACGCCCC CTCGGAGGTG GCCGCATGGA TCGCCTCCTT CGAGGCCCCC AAGGCGGTCT ACGAGTCCGG CGTGACCGGG TTCCACCTGC AGCGGGAGCT CGAGGCGCTC GGCGTCGACT GCGTGATCGG CGCCGTGTCC AAGATGGACA AGCCGGCGGC CGACAGGCGC AAGAAGACCG ACAGGCGCGA CGCCGCCTTC CTCGCGAGGC AGCTCGCGCT CGGCACCGTG ACGGAGGTGC ACGTCCCCGA CCCCGAGTGC GAGGCCTGCC GCGACATCTC CCGCGCCCTG GAGGACGCGC GCGAGGACGT CGTCGCGTGC AAGCAGCGCC TCTCGAAGAT GCTCCTGCGC TACGGCTACG TCTACGACGA GGTCAACGAG AGGGGGCAGC GGAAGAAGGC GTGGACGAAG GCGCACTGGG CCTGGATCGA GTCGATAAGG CTGGCGGAGC CGGCCGCGCA GGAGGCCCTC GACTACTACG TCGACCGCTG CAGGCGGGCC ATCGACGAGA AGCGCGCGCT GGCGGCGAAG GTCGCGGCAC ACGCGTCCGG GCCGCGGTGG AAGCCCGAGG TCGACGCGCT CAGGCTGTTC AAGGGCGTCG AGGTCGTGAC GGCCTTCGCC TTCGCGTGCG AGGTCGACGG CTTCTCGAGG TTCCGCAGCG CGTCGGCTTT CGCGTCGTGG CTGGGCCTCG TCCCCTCGGA GGCGTCCAGC GCCGACGCCA GGCGCCAGGG CGGGATAACG AAGTCCGGCA ACAGGCACCT GCGGAGGCTG CTCGTCGAGG CGGCCTGGCA CTACGCGAGC GCGACGAGGA GCCCGAAGAG GCCCGCGGCC GGCTGCGAGG TCCCTCCCGA GGTTGCCAGG CATGCGGCGA AGGGGGTGCG CAGGCTCGTG GACAGGCGCG CCGCGCTGTC CGCAGCGGGA AAGAAGCCGG TCGTCGCGAA CTGCGCGACG GCGCGCGAGC TCGCGTGCTG GATCTGGGCC GTGGGCTGCA TGGTGGAGGC CGAGTAG
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Protein sequence | MAHVTSIGLD VHARSIKACA FNPFTGEVAR RSFAYAPSEV AAWIASFEAP KAVYESGVTG FHLQRELEAL GVDCVIGAVS KMDKPAADRR KKTDRRDAAF LARQLALGTV TEVHVPDPEC EACRDISRAL EDAREDVVAC KQRLSKMLLR YGYVYDEVNE RGQRKKAWTK AHWAWIESIR LAEPAAQEAL DYYVDRCRRA IDEKRALAAK VAAHASGPRW KPEVDALRLF KGVEVVTAFA FACEVDGFSR FRSASAFASW LGLVPSEASS ADARRQGGIT KSGNRHLRRL LVEAAWHYAS ATRSPKRPAA GCEVPPEVAR HAAKGVRRLV DRRAALSAAG KKPVVANCAT ARELACWIWA VGCMVEAE
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