Gene Shel_27460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27460 
Symbol 
ID8396634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3039331 
End bp3040560 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content62% 
IMG OID644987488 
ProductdGTP triphosphohydrolase 
Protein accessionYP_003145093 
Protein GI257065421 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0232] dGTP triphosphohydrolase 
TIGRFAM ID[TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTACG TAAATTTCAG CAAGGACTTT CAGGAACAAT TCGAACACGA CCGGGCCGAA 
GGGATCGTCA ACCCGTGGCG CTGCCCCGAC GAGGCCGTGG TGCGCCGCAA CCCGAAACGG
GACATGTCGC CCAGGCTGCA CCGCCCGCCT TTCCAGCGTG ACATCGACAA GATCCTCAAC
GTGGCGCCGT ACAACCGCTA CGCCGGAAAA ACCCAGGTGT TCAGCTTCAT CCGCAACGAC
GACATCAGCC GCCGCGGGCT GCACGTGCAG CTGGTCGCCC GCACAGCGCG CAGCATCGGC
CGCATGCTCG GGCTGAACGA CAACCTGATC GAAGCCATCG CGCTGGGCCA TGACCTGGGG
CACACGCCCT TCGGCCACGC CGGCGAGCAC ATTCTGAACG ACCTGTACCA CGAGGCCACG
GGGCGTTACT TCAACCACAA TGTGCACAGC GTGCGCGTGC TTGACCGTTT GTACGCCCGC
AACCTGAGCC TGCAGGCGCT GGACGGCATC ATCTGCCACA ACGGCGAAAG CAGTCAGAAG
GAGTTCTGGC GGGGCGAAAT CCACGACTTC GACGCCTTCG ACCGAATGGT GGAGGAATGC
TACGTGAACG AAACCACCAT CGGGCGGCTG CGCCCGTCCA CGTTGGAGGG TTGCGTGGTG
CGCATTTCGG ACATGATCGC GTACGTGGGC AAGGACCGTC AGGATGCCAT CAACACAGGT
TCTATCAGCG ACGATTCGAT TTTCTCCGGC GGCGTGCTGG GCGTGCAGAA CGCGCAGATC
ATCAACAACC TGACGGTGGA CATCGTCGAG CACAGCTACA TGAAGGACCA CATCGAGATG
AGCGAGGACG CCTTCCGGAG CTTGAAGACC GCGAAGGCCG AGAACTACGA GCGCATTTAC
CTGGCCGACG GCCAGGGCGA CGTCTACGAC GAGCAGATTC GCCCCATGTT CGGCGAGCTG
TTCGCCCAGA TCGTGCGGGA CATCGAAGCC AACAACCAGC AGTCGCCGGT GTTCCAGCAT
TTCATCCTGC CCACCGAGCG GCAGCGCTCG TTCTACGAGG CCGAAGACCC CTACCGCGCG
TCGGACGCTC CCACCATTGC CACGGACTAT CTGGCCTCCA TGACCGATGA GTATTTCCTG
TCGGCGCATC GGTTCATGTG CCCCGACAGC CCCCACGACG TGCAGTTCCG CGACTACTTT
GACGGCATGC CCTACGCCCC CGTGCAGTAA
 
Protein sequence
MPYVNFSKDF QEQFEHDRAE GIVNPWRCPD EAVVRRNPKR DMSPRLHRPP FQRDIDKILN 
VAPYNRYAGK TQVFSFIRND DISRRGLHVQ LVARTARSIG RMLGLNDNLI EAIALGHDLG
HTPFGHAGEH ILNDLYHEAT GRYFNHNVHS VRVLDRLYAR NLSLQALDGI ICHNGESSQK
EFWRGEIHDF DAFDRMVEEC YVNETTIGRL RPSTLEGCVV RISDMIAYVG KDRQDAINTG
SISDDSIFSG GVLGVQNAQI INNLTVDIVE HSYMKDHIEM SEDAFRSLKT AKAENYERIY
LADGQGDVYD EQIRPMFGEL FAQIVRDIEA NNQQSPVFQH FILPTERQRS FYEAEDPYRA
SDAPTIATDY LASMTDEYFL SAHRFMCPDS PHDVQFRDYF DGMPYAPVQ