| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_27350 |
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| Symbol | |
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| ID | 8396623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 3025391 |
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| End bp | 3028462 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644987477 |
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| Product | anaerobic dehydrogenase, typically selenocysteine-containing |
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| Protein accession | YP_003145082 |
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| Protein GI | 257065410 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATC TCACAATGTC TCGACGCTCA TTCGTGAAGA CAGCTGCCAT TACCGGCGCT
GCTGTTGCAG CGTTTGGAAC GTCTACGCAG TCCGCATTGG CCGATCAAAC CTATCCCGAG
GTTTCCGGCC AAGACACCGT AGAGGTCAAG ACATGTTGCC GCGGCTGCGG CAAGATGGAA
TGTGGCGTCA AGGTGATTGT CCAAAACGGT CGGGCGATCC GCATCGAGGG CGACGAAGGG
GCTTGGCAGT CCATGGGCAA CTGCTGCACG AAGTCCCAGT CGTCCATTCA GGCTGCGTAT
CACCCTGACA GGCTTCATTA CCCCATGAAG CGCACGAACC CCAAGGGCGA AGAGCCGGGC
TGGGTGCGTA TTTCCTGGGA CGAGGCCATG GAAACCATTA TCAAGAACTT CGCCGAGATC
ACGGAGAAAT ACGGCGCTGA ATCCATTGCA TGCCAGGTGG GTACGTCCCG CGTGTGGTGC
ATGCATTCGG AATCCATCCT GAAGAACCTG CTGGGCACGC CGAACAACAT CGAAGCTTGG
CAGATCTGCA AGGGTCCGCG TCATTTTGCA ACCACCATGG TCAGCCAGTT CGCCCTGAGC
TGGATGGAGA CCATCGGCCG CCCGCGTGTC TACGTGCAGT GGGCAGGCGC TTCCGAGCTG
TCCAACTACG ACACATCGTG CCGCACCACC GTCGACTGCG CAAGCCGCGC CGATTATCAC
ATCAGCGTTG ACCCGCGTAT GGCCAACATG GGCAAGGAAG CCGACTACTG GCAATGCCTG
CGTCCTGGCA CCGATGGCGC GCTGGCGCTG GCTTGGACCA ACGTCATCAT CGAGAACAAG
CTCTACGACG AACTGTATGT CAAGAAGTGG ACCAACGCAC CGTTCTTGGT CTGCGAAGAC
TTCGACGAAG AATGGATGCT GGAGAACGGC TTCCCCACCG TCCGCACCGA CGGTTCGTAC
TGGGATGTCA AGACCCATCT CGTCAAGGAA AGCGACATCA AAGAGGGCGG CAGCCCCTTC
AAGTTCCTGG TATACGACAA TAACTGGGAA GCTCTTAAAG AACAGGGCGT CGAGCATGAG
TACGGCGCAT TCACCTGGTT CAACGCCGAC CAGGAAGCCC GCATCGACAA CACCGGCGGC
TTCTGGGAGG GCGAGAACTA CTCCACCACA AAAGCCTATG AGGGCCATGA GGCCCAGCAA
CCCAACTTGC TGCCTGGCCA GACCCAGGGT TGGCTGCCCG ACCTGCTGCC CTTCGACCCG
GCCATCGATC CGGCTCTGGA AGGCGAATTC GAGATCACGC TCAAGGACGG CCGCACCGTC
AAGGTGAAAC CGGTCTGGGA GCACTACAAA GCCCGCGCTG CCGAGTACAA CCCCGAGGTT
GCCTCTGAGA TCACCGGCAT CCCCGCCGAT CAGATCATCG AAGCAGCAAC CGTGTACGGC
ACCCGCCTCG ACCCCGAGAG CGGCTACGGC AACGGCGGCA TCCAGTACAT GCTGGCGCAG
GAGCATGCAT GCAACTGCGT GCAGAACAGC CGCGCGCTGG ACAACCTGTG CGGCATCACC
GGTAACATGG ACACTCCGGG CGGCATGCGC GGCCCCACCA TGGTGCCGAT CGACGGCGAC
CTGCAGGGCT TCTCCGCATG GGCACCAGGT GCTTCCACCC CGCCCGCCGA GATCATGGAG
AAGCAGATCG GCATGGAGCG CTTCCCGCTG CTGCACTGGT GGCAGTACTG GAGCGACGCA
TCCACCTGCT GGGATGCCGT GCTCGAGGGC GACCCCTATC CGCTGAAGGC GCTGTGGAAC
GAGTCCGGCA ACTTCATGAG CCAGACCAAC ACCGCCCGTG CATGGGAGGC CCTGTGCAAC
CTGGAGTTTA TGGTCGACTT GAACCTGTGG CATGCGCCTT CTACCGACGC CGCCGATATC
ATCCTGCCCG TTGCCCACTG GATTGAGCTC AACTCGCCTC GTGCCAGCCA GGGTTCCGAG
GGCGCCATGG GTGCTACAGT CAAGTGCGTA CAGCCTCCCG CAGAGGCCAA GTACGATCCC
GAGATCGTCA TGGACCTGGC TCGTCGCATG GGCGTGCCTT GGAACAACGA AGAGGGCAAC
GAATGGCCCG ACATCGAGTG GCAGCTGGCC GACGCCATCA AACTCTTCAG CGACGAAGAA
TGGACCTACA CCGAGTATGA GGTCAAGGAC GGCGAGGTTT CCTTCGAACG CAAGGGTACG
AAGCTTGAGG ACCTCACGCC TAAGTACAAG ACGTGGGACG AGTACGTCGA GGCCTTCCAG
CGCGATGGCT GGTGGCAGGC CAAGGACGTG GACCCGAAGC AGTGGGGCAC CTACCGTCGT
TATCAGACCG GCGGTTTCCG CGCCCGCGAC CGCGTGTGGG CCCGTCTGGA CTACACCGCC
GGCAACGGCA TCGGCGACTG GAAGCCTGGC TTCTTCACCC CGACCATGAA GCAGGAGCTG
TGGTCTACGG TCATGGAGAG CCACTTCCCC GACAAGCCCG AGTGGTTCCT GCCCAGCTGG
GTTGAGCCGC CTCACGGGCC GAAGGACGGC GACCGCATCA AAGAGTACCC GCTGACCGCT
ACCACAGGCC GCCGCATCCC GGTGTACTTC CACTCCGAGC ATCGCCAGCT TCCCTGGTGC
CGCGAGCTTT GGCCCGTGCC TCGTATCGAA ATCAACCCTG AGACCGCTGC CGAATACGGC
ATCGAGCAGG GCGACTGGGT CTGGATCGAG TCCGAGTGGG GCAAGATTCG CGAAGTTGCC
GACCTGTACT ACGGCGTCGA CAAGGATGTT GTCAACCTGG AGCACACCTG GTGGTATCCG
GAGCTGTCGC AGAACGCCGG CCACGGCATC GAACTCTCCG CGGTGAACAA CCTCATCGAC
CATCATGCTC AGGACCCGCA TGCCGGTTCT TCCAACCTGC GCGCCTACCA GGTGAAGATC
TACAAGGCAA CCCCTGAGAA CAGCCCGTTC AACAATCCCG TTCCCTGCGG CGTCGACGGT
GTGCCCATCA TCCATACCTC CGACGACCCG CGTCTGAAGG AATGGCTGCC CACCTACGAA
GGGAGGGAGT AA
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| Protein sequence | MGDLTMSRRS FVKTAAITGA AVAAFGTSTQ SALADQTYPE VSGQDTVEVK TCCRGCGKME
CGVKVIVQNG RAIRIEGDEG AWQSMGNCCT KSQSSIQAAY HPDRLHYPMK RTNPKGEEPG
WVRISWDEAM ETIIKNFAEI TEKYGAESIA CQVGTSRVWC MHSESILKNL LGTPNNIEAW
QICKGPRHFA TTMVSQFALS WMETIGRPRV YVQWAGASEL SNYDTSCRTT VDCASRADYH
ISVDPRMANM GKEADYWQCL RPGTDGALAL AWTNVIIENK LYDELYVKKW TNAPFLVCED
FDEEWMLENG FPTVRTDGSY WDVKTHLVKE SDIKEGGSPF KFLVYDNNWE ALKEQGVEHE
YGAFTWFNAD QEARIDNTGG FWEGENYSTT KAYEGHEAQQ PNLLPGQTQG WLPDLLPFDP
AIDPALEGEF EITLKDGRTV KVKPVWEHYK ARAAEYNPEV ASEITGIPAD QIIEAATVYG
TRLDPESGYG NGGIQYMLAQ EHACNCVQNS RALDNLCGIT GNMDTPGGMR GPTMVPIDGD
LQGFSAWAPG ASTPPAEIME KQIGMERFPL LHWWQYWSDA STCWDAVLEG DPYPLKALWN
ESGNFMSQTN TARAWEALCN LEFMVDLNLW HAPSTDAADI ILPVAHWIEL NSPRASQGSE
GAMGATVKCV QPPAEAKYDP EIVMDLARRM GVPWNNEEGN EWPDIEWQLA DAIKLFSDEE
WTYTEYEVKD GEVSFERKGT KLEDLTPKYK TWDEYVEAFQ RDGWWQAKDV DPKQWGTYRR
YQTGGFRARD RVWARLDYTA GNGIGDWKPG FFTPTMKQEL WSTVMESHFP DKPEWFLPSW
VEPPHGPKDG DRIKEYPLTA TTGRRIPVYF HSEHRQLPWC RELWPVPRIE INPETAAEYG
IEQGDWVWIE SEWGKIREVA DLYYGVDKDV VNLEHTWWYP ELSQNAGHGI ELSAVNNLID
HHAQDPHAGS SNLRAYQVKI YKATPENSPF NNPVPCGVDG VPIIHTSDDP RLKEWLPTYE
GRE
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